Difference between revisions of "Tiso gene 1366"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-218 RXN3O-218] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6890 PWY-6890] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-218 RXN3O-218] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6890 PWY-6890] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://enzyme.expasy.org/EC/1.14.19.20 EC-1.14.19.20]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33630 TAX-33630]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
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** 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
 
* Synonym(s):
 
* Synonym(s):
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** HMP-PP biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''2''' reactions in the full pathway
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** 2 [[FERROCYTOCHROME-B5]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[EPISTEROL]][c] '''=>''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[CPD-700]][c] '''+''' 2 [[WATER]][c]
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* [[PYRIMSYN3-RXN]]
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* With common name(s):
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** 4 associated gene(s):
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** 2 a ferrocytochrome b5[c] '''+''' 2 H+[c] '''+''' 1 oxygen[c] '''+''' 1 episterol[c] '''=>''' 2 a ferricytochrome b5[c] '''+''' 1 ergosta-5,7,24(28)-trien-3β-ol[c] '''+''' 2 H2O[c]
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*** [[Tiso_gene_2159]]
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*** [[Tiso_gene_16224]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_17192]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_2160]]
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* [[Tiso_gene_5446]]
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** 3 reconstruction source(s) associated:
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** [[pantograph]]-[[athaliana]]
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*** [[orthology-athaliana]]
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== Pathways  ==
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*** [[annotation-in-silico_annotation]]
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* [[PWY-6075]], ergosterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6075 PWY-6075]
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*** [[orthology-esiliculosus]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reaction(s) not found ==
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* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRIMSYN1-RXN PYRIMSYN1-RXN]
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** '''10''' reactions found over '''36''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33463 33463]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6890 PWY-6890]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07505 R07505]
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07491 R07491]
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{{#set: taxonomic range=TAX-33630}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: ec number=EC-1.14.19.20}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: gene associated=Tiso_gene_5446}}
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{{#set: common name=4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis}}
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{{#set: in pathway=PWY-6075|PWY-2541}}
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{{#set: common name=HMP-PP biosynthesis}}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction found=1}}
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{{#set: reconstruction source=orthology-athaliana}}
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{{#set: total reaction=2}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: completion rate=50.0}}

Revision as of 15:21, 21 March 2018

Pathway PWY-6890

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links






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