Difference between revisions of "CPD-19151"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-3...")
(Created page with "Category:Gene == Gene Tiso_gene_1960 == * right end position: ** 20506 * transcription direction: ** POSITIVE * left end position: ** 16698 * centisome position: ** 79.412...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118] ==
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== Gene Tiso_gene_1960 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
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** 20506
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* common name:
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* transcription direction:
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** chitin degradation to ethanol
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** POSITIVE
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* left end position:
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** 16698
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* centisome position:
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** 79.412186   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''4''' reactions found over '''6''' reactions in the full pathway
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* Reaction: [[ATPASE-RXN]]
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* [[1.1.1.39-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 3 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_12896]]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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*** [[Tiso_gene_6675]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_12200]]
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*** Assignment: ec-number
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** 3 reconstruction source(s) associated:
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* Reaction: [[RXN-12195]]
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*** [[annotation-experimental_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** [[orthology-esiliculosus]]
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* Reaction: [[RXN-12196]]
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* [[ACETATE--COA-LIGASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 3 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_1612]]
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* Reaction: [[RXN0-5462]]
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*** [[Tiso_gene_3617]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_3616]]
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*** Assignment: ec-number
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** 6 reconstruction source(s) associated:
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== Pathways associated ==
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*** [[annotation-experimental_annotation]]
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* [[PWY-7184]]
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*** [[orthology-esiliculosus]]
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* [[PWY-7198]]
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*** [[annotation-in-silico_annotation]]
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* [[PWY-6545]]
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*** [[orthology-synechocystis]]
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* [[PWY-7210]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[ALCOHOL-DEHYDROG-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_7649]]
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*** [[Tiso_gene_18459]]
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*** [[Tiso_gene_6562]]
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*** [[Tiso_gene_6563]]
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*** [[Tiso_gene_5424]]
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*** [[Tiso_gene_5425]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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* [[MALSYN-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_14377]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=CHITIN-DEACETYLASE-RXN CHITIN-DEACETYLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6161 RXN-6161]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33154}}
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{{#set: right end position=20506}}
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{{#set: common name=chitin degradation to ethanol}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: reaction found=4}}
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{{#set: left end position=16698}}
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{{#set: total reaction=6}}
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{{#set: centisome position=79.412186    }}
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{{#set: completion rate=67.0}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}

Revision as of 15:26, 21 March 2018

Gene Tiso_gene_1960

  • right end position:
    • 20506
  • transcription direction:
    • POSITIVE
  • left end position:
    • 16698
  • centisome position:
    • 79.412186
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-19151&oldid=34154"