Difference between revisions of "7-METHYLXANTHINE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16101 RXN-16101] == * direction: ** LEFT-TO-RIGHT * common name: ** delta-8_desaturase * ec num...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNA-LIGASE-ATP-RXN DNA-LIGASE-ATP-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dna_ligas...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16101 RXN-16101] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNA-LIGASE-ATP-RXN DNA-LIGASE-ATP-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** delta-8_desaturase
+
** dna_ligase
 +
** dna_ligase_mrna_capping_enzyme
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.19.4 EC-1.14.19.4]
+
** [http://enzyme.expasy.org/EC/6.5.1.7 EC-6.5.1.7]
 +
** [http://enzyme.expasy.org/EC/6.5.1.1 EC-6.5.1.1]
 +
** [http://enzyme.expasy.org/EC/6.5.1.6 EC-6.5.1.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-17352]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[CPD-17281]][c] '''+''' 2 [[WATER]][c]
+
** 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[3-Hydroxy-Terminated-DNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[DNA-N]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [glycerolipid]-(11Z,14Z,17Z)-icosatrienoate[c] '''+''' 2 a ferrocytochrome b5[c] '''+''' 1 oxygen[c] '''+''' 2 H+[c] '''=>''' 2 a ferricytochrome b5[c] '''+''' 1 a [glycerolipid]-icosatetraenoate[c] '''+''' 2 H2O[c]
+
** 1 a 5'-phospho-[DNA][c] '''+''' 1 ATP[c] '''+''' 1 a [DNA]-3'-hydroxyl[c] '''=>''' 1 diphosphate[c] '''+''' 1 DNAn[c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5024]]
+
* [[Tiso_gene_12142]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
 +
* [[Tiso_gene_14250]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_11251]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_14249]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_3498]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_6743]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7602 PWY-7602]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00381 R00381]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P12000 P12000]
 +
** [http://www.uniprot.org/uniprot/P18858 P18858]
 +
** [http://www.uniprot.org/uniprot/P35970 P35970]
 +
** [http://www.uniprot.org/uniprot/Q9QNG8 Q9QNG8]
 +
** [http://www.uniprot.org/uniprot/Q9PM08 Q9PM08]
 +
** [http://www.uniprot.org/uniprot/Q57635 Q57635]
 +
** [http://www.uniprot.org/uniprot/P49917 P49917]
 +
** [http://www.uniprot.org/uniprot/P49916 P49916]
 +
** [http://www.uniprot.org/uniprot/P37913 P37913]
 +
** [http://www.uniprot.org/uniprot/P51892 P51892]
 +
** [http://www.uniprot.org/uniprot/P16272 P16272]
 +
** [http://www.uniprot.org/uniprot/P33798 P33798]
 +
** [http://www.uniprot.org/uniprot/P00970 P00970]
 +
** [http://www.uniprot.org/uniprot/P00969 P00969]
 +
** [http://www.uniprot.org/uniprot/P04819 P04819]
 +
** [http://www.uniprot.org/uniprot/P19088 P19088]
 +
** [http://www.uniprot.org/uniprot/P07717 P07717]
 +
** [http://www.uniprot.org/uniprot/P26813 P26813]
 +
** [http://www.uniprot.org/uniprot/Q02093 Q02093]
 +
** [http://www.uniprot.org/uniprot/Q23694 Q23694]
 +
** [http://www.uniprot.org/uniprot/Q67480 Q67480]
 +
** [http://www.uniprot.org/uniprot/Q42572 Q42572]
 +
** [http://www.uniprot.org/uniprot/P20492 P20492]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=delta-8_desaturase}}
+
{{#set: common name=dna_ligase}}
−
{{#set: ec number=EC-1.14.19.4}}
+
{{#set: common name=dna_ligase_mrna_capping_enzyme}}
−
{{#set: gene associated=Tiso_gene_5024}}
+
{{#set: common name=ORF}}
−
{{#set: in pathway=PWY-7602}}
+
{{#set: ec number=EC-6.5.1.7}}
 +
{{#set: ec number=EC-6.5.1.1}}
 +
{{#set: ec number=EC-6.5.1.6}}
 +
{{#set: gene associated=Tiso_gene_12142|Tiso_gene_14250|Tiso_gene_11251|Tiso_gene_14249|Tiso_gene_3498|Tiso_gene_6743}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=in-silico_annotation}}
 
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 15:36, 10 January 2018

Reaction DNA-LIGASE-ATP-RXN

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links








Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=7-METHYLXANTHINE&oldid=9739"