Difference between revisions of "Ubiquinones"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSHTRAN-RXN GSHTRAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutathione_s-transfera...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.1-RXN 3.1.27.1-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** uncharacterized_prote...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSHTRAN-RXN GSHTRAN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.1-RXN 3.1.27.1-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** glutathione_s-transferase
+
** uncharacterized_protein
−
** glutathione_s-
+
 
** ORF
 
** ORF
−
** phi_class_glutathione_s-transferase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.18 EC-2.5.1.18]
+
** [http://enzyme.expasy.org/EC/3.1.27.1 EC-3.1.27.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GLUTATHIONE]][c] '''+''' 1 [[RX]][c] '''=>''' 1 [[S-Substituted-Glutathione]][c] '''+''' 1 [[HX]][c]
+
** 1 [[RNA-Holder]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[3-Phosphomonucleotides]][c] '''+''' 1 [[3-phosphooligoribonucleotides]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 glutathione[c] '''+''' 1 RX[c] '''=>''' 1 a glutathione-toxin conjugate[c] '''+''' 1 HX[c]
+
** 1 RNA[c] '''+''' 1 H2O[c] '''=>''' 1 a ribonucleoside 3'-phosphate[c] '''+''' 1 a 3' phosphooligo-ribonucleotide RNA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_19791]]
+
* Gene: [[Tiso_gene_8896]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_13100]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[athaliana]]
+
* Gene: [[Tiso_gene_11979]]
−
* [[Tiso_gene_20110]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6036]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3535]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_1104]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_8508]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_19041]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_1666]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_8389]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3233]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_8509]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_5129]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_2775]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[athaliana]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6842]], glutathione-mediated detoxification II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6842 PWY-6842]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-4061]], glutathione-mediated detoxification I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4061 PWY-4061]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03522 R03522]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P30116 P30116]
+
** [http://www.uniprot.org/uniprot/Q7M439 Q7M439]
−
** [http://www.uniprot.org/uniprot/P04903 P04903]
+
** [http://www.uniprot.org/uniprot/Q7M329 Q7M329]
−
** [http://www.uniprot.org/uniprot/P04904 P04904]
+
** [http://www.uniprot.org/uniprot/Q7M330 Q7M330]
−
** [http://www.uniprot.org/uniprot/P13745 P13745]
+
** [http://www.uniprot.org/uniprot/P10281 P10281]
−
** [http://www.uniprot.org/uniprot/P08011 P08011]
+
** [http://www.uniprot.org/uniprot/P00649 P00649]
−
** [http://www.uniprot.org/uniprot/Q7M0B7 Q7M0B7]
+
−
** [http://www.uniprot.org/uniprot/P08009 P08009]
+
−
** [http://www.uniprot.org/uniprot/P04905 P04905]
+
−
** [http://www.uniprot.org/uniprot/P21266 P21266]
+
−
** [http://www.uniprot.org/uniprot/P09211 P09211]
+
−
** [http://www.uniprot.org/uniprot/P28161 P28161]
+
−
** [http://www.uniprot.org/uniprot/Q08863 Q08863]
+
−
** [http://www.uniprot.org/uniprot/P30109 P30109]
+
−
** [http://www.uniprot.org/uniprot/P28338 P28338]
+
−
** [http://www.uniprot.org/uniprot/P46088 P46088]
+
−
** [http://www.uniprot.org/uniprot/P15964 P15964]
+
−
** [http://www.uniprot.org/uniprot/P46439 P46439]
+
−
** [http://www.uniprot.org/uniprot/Q9VG97 Q9VG97]
+
−
** [http://www.uniprot.org/uniprot/Q03013 Q03013]
+
−
** [http://www.uniprot.org/uniprot/P41043 P41043]
+
−
** [http://www.uniprot.org/uniprot/P28801 P28801]
+
−
** [http://www.uniprot.org/uniprot/P46418 P46418]
+
−
** [http://www.uniprot.org/uniprot/P46425 P46425]
+
−
** [http://www.uniprot.org/uniprot/P0A9D2 P0A9D2]
+
−
** [http://www.uniprot.org/uniprot/P08263 P08263]
+
−
** [http://www.uniprot.org/uniprot/P30712 P30712]
+
−
** [http://www.uniprot.org/uniprot/Q9NAW7 Q9NAW7]
+
−
** [http://www.uniprot.org/uniprot/P08515 P08515]
+
−
** [http://www.uniprot.org/uniprot/P10620 P10620]
+
−
** [http://www.uniprot.org/uniprot/P19639 P19639]
+
−
** [http://www.uniprot.org/uniprot/Q9WU21 Q9WU21]
+
−
** [http://www.uniprot.org/uniprot/P15626 P15626]
+
−
** [http://www.uniprot.org/uniprot/Q08862 Q08862]
+
−
** [http://www.uniprot.org/uniprot/P26624 P26624]
+
−
** [http://www.uniprot.org/uniprot/Q03377 Q03377]
+
−
** [http://www.uniprot.org/uniprot/P19157 P19157]
+
−
** [http://www.uniprot.org/uniprot/P20137 P20137]
+
−
** [http://www.uniprot.org/uniprot/Q9VG95 Q9VG95]
+
−
** [http://www.uniprot.org/uniprot/Q9VG98 Q9VG98]
+
−
** [http://www.uniprot.org/uniprot/Q9VG96 Q9VG96]
+
−
** [http://www.uniprot.org/uniprot/O31817 O31817]
+
−
** [http://www.uniprot.org/uniprot/Q8X6U4 Q8X6U4]
+
−
** [http://www.uniprot.org/uniprot/P30713 P30713]
+
−
** [http://www.uniprot.org/uniprot/Q42706 Q42706]
+
−
** [http://www.uniprot.org/uniprot/Q28514 Q28514]
+
−
** [http://www.uniprot.org/uniprot/Q9TXB7 Q9TXB7]
+
−
** [http://www.uniprot.org/uniprot/P09792 P09792]
+
−
** [http://www.uniprot.org/uniprot/P16413 P16413]
+
−
** [http://www.uniprot.org/uniprot/P81706 P81706]
+
−
** [http://www.uniprot.org/uniprot/P09488 P09488]
+
−
** [http://www.uniprot.org/uniprot/Q7M446 Q7M446]
+
−
** [http://www.uniprot.org/uniprot/P10299 P10299]
+
−
** [http://www.uniprot.org/uniprot/Q7M0B6 Q7M0B6]
+
−
** [http://www.uniprot.org/uniprot/Q7M0C0 Q7M0C0]
+
−
** [http://www.uniprot.org/uniprot/Q7M0F7 Q7M0F7]
+
−
** [http://www.uniprot.org/uniprot/P22416 P22416]
+
−
** [http://www.uniprot.org/uniprot/P30102 P30102]
+
−
** [http://www.uniprot.org/uniprot/P28342 P28342]
+
−
** [http://www.uniprot.org/uniprot/P24473 P24473]
+
−
** [http://www.uniprot.org/uniprot/Q7M0F4 Q7M0F4]
+
−
** [http://www.uniprot.org/uniprot/Q7M0F3 Q7M0F3]
+
−
** [http://www.uniprot.org/uniprot/P26697 P26697]
+
−
** [http://www.uniprot.org/uniprot/Q9PS57 Q9PS57]
+
−
** [http://www.uniprot.org/uniprot/Q9JLQ6 Q9JLQ6]
+
−
** [http://www.uniprot.org/uniprot/P30115 P30115]
+
−
** [http://www.uniprot.org/uniprot/P09210 P09210]
+
−
** [http://www.uniprot.org/uniprot/Q01579 Q01579]
+
−
** [http://www.uniprot.org/uniprot/P24472 P24472]
+
−
** [http://www.uniprot.org/uniprot/Q7M0F5 Q7M0F5]
+
−
** [http://www.uniprot.org/uniprot/Q7M0F6 Q7M0F6]
+
−
** [http://www.uniprot.org/uniprot/Q7M0F2 Q7M0F2]
+
−
** [http://www.uniprot.org/uniprot/Q9TQQ8 Q9TQQ8]
+
−
** [http://www.uniprot.org/uniprot/Q7M0B8 Q7M0B8]
+
−
** [http://www.uniprot.org/uniprot/Q7M059 Q7M059]
+
−
** [http://www.uniprot.org/uniprot/P30568 P30568]
+
−
** [http://www.uniprot.org/uniprot/Q03425 Q03425]
+
−
** [http://www.uniprot.org/uniprot/P10649 P10649]
+
−
** [http://www.uniprot.org/uniprot/P46422 P46422]
+
−
** [http://www.uniprot.org/uniprot/P45875 P45875]
+
−
** [http://www.uniprot.org/uniprot/P42769 P42769]
+
−
** [http://www.uniprot.org/uniprot/P46436 P46436]
+
−
** [http://www.uniprot.org/uniprot/Q7M0F1 Q7M0F1]
+
−
** [http://www.uniprot.org/uniprot/P42760 P42760]
+
−
** [http://www.uniprot.org/uniprot/P42761 P42761]
+
−
** [http://www.uniprot.org/uniprot/Q9GQE3 Q9GQE3]
+
−
** [http://www.uniprot.org/uniprot/P46427 P46427]
+
−
** [http://www.uniprot.org/uniprot/P48438 P48438]
+
−
** [http://www.uniprot.org/uniprot/Q08392 Q08392]
+
−
** [http://www.uniprot.org/uniprot/Q08393 Q08393]
+
−
** [http://www.uniprot.org/uniprot/P30711 P30711]
+
−
** [http://www.uniprot.org/uniprot/Q9UDH6 Q9UDH6]
+
−
** [http://www.uniprot.org/uniprot/Q9UDH3 Q9UDH3]
+
−
** [http://www.uniprot.org/uniprot/Q9UDH2 Q9UDH2]
+
−
** [http://www.uniprot.org/uniprot/Q9UDH1 Q9UDH1]
+
−
** [http://www.uniprot.org/uniprot/P46432 P46432]
+
−
** [http://www.uniprot.org/uniprot/P46433 P46433]
+
−
** [http://www.uniprot.org/uniprot/P46420 P46420]
+
−
** [http://www.uniprot.org/uniprot/P27013 P27013]
+
−
** [http://www.uniprot.org/uniprot/P27014 P27014]
+
−
** [http://www.uniprot.org/uniprot/P20135 P20135]
+
−
** [http://www.uniprot.org/uniprot/P46409 P46409]
+
−
** [http://www.uniprot.org/uniprot/P46421 P46421]
+
−
** [http://www.uniprot.org/uniprot/P46431 P46431]
+
−
** [http://www.uniprot.org/uniprot/Q7M0B9 Q7M0B9]
+
−
** [http://www.uniprot.org/uniprot/Q7M3E7 Q7M3E7]
+
−
** [http://www.uniprot.org/uniprot/Q7M3E8 Q7M3E8]
+
−
** [http://www.uniprot.org/uniprot/Q7M3E9 Q7M3E9]
+
−
** [http://www.uniprot.org/uniprot/Q64471 Q64471]
+
−
** [http://www.uniprot.org/uniprot/Q91VB0 Q91VB0]
+
−
** [http://www.uniprot.org/uniprot/P15214 P15214]
+
−
** [http://www.uniprot.org/uniprot/P47954 P47954]
+
−
** [http://www.uniprot.org/uniprot/Q60550 Q60550]
+
−
** [http://www.uniprot.org/uniprot/Q12760 Q12760]
+
−
** [http://www.uniprot.org/uniprot/O65032 O65032]
+
−
** [http://www.uniprot.org/uniprot/O65857 O65857]
+
−
** [http://www.uniprot.org/uniprot/O82451 O82451]
+
−
** [http://www.uniprot.org/uniprot/O24595 O24595]
+
−
** [http://www.uniprot.org/uniprot/O49235 O49235]
+
−
** [http://www.uniprot.org/uniprot/O04437 O04437]
+
−
** [http://www.uniprot.org/uniprot/P30110 P30110]
+
−
** [http://www.uniprot.org/uniprot/P30111 P30111]
+
−
** [http://www.uniprot.org/uniprot/O04874 O04874]
+
−
** [http://www.uniprot.org/uniprot/P32111 P32111]
+
−
** [http://www.uniprot.org/uniprot/O22330 O22330]
+
−
** [http://www.uniprot.org/uniprot/O49821 O49821]
+
−
** [http://www.uniprot.org/uniprot/O65344 O65344]
+
−
** [http://www.uniprot.org/uniprot/O81602 O81602]
+
−
** [http://www.uniprot.org/uniprot/O85984 O85984]
+
−
** [http://www.uniprot.org/uniprot/Q21355 Q21355]
+
−
** [http://www.uniprot.org/uniprot/O16115 O16115]
+
−
** [http://www.uniprot.org/uniprot/O16116 O16116]
+
−
** [http://www.uniprot.org/uniprot/Q9ZRT5 Q9ZRT5]
+
−
** [http://www.uniprot.org/uniprot/Q9ZRW8 Q9ZRW8]
+
−
** [http://www.uniprot.org/uniprot/Q9SM20 Q9SM20]
+
−
** [http://www.uniprot.org/uniprot/Q9ZP62 Q9ZP62]
+
−
** [http://www.uniprot.org/uniprot/Q9ZS18 Q9ZS18]
+
−
** [http://www.uniprot.org/uniprot/Q9ZS16 Q9ZS16]
+
−
** [http://www.uniprot.org/uniprot/Q9SB97 Q9SB97]
+
−
** [http://www.uniprot.org/uniprot/Q9ZS17 Q9ZS17]
+
−
** [http://www.uniprot.org/uniprot/Q9ZRR6 Q9ZRR6]
+
−
** [http://www.uniprot.org/uniprot/P20432 P20432]
+
−
** [http://www.uniprot.org/uniprot/P14942 P14942]
+
−
** [http://www.uniprot.org/uniprot/P08010 P08010]
+
−
** [http://www.uniprot.org/uniprot/P04906 P04906]
+
−
** [http://www.uniprot.org/uniprot/P12653 P12653]
+
−
** [http://www.uniprot.org/uniprot/P04907 P04907]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=glutathione_s-transferase}}
+
{{#set: common name=uncharacterized_protein}}
−
{{#set: common name=glutathione_s-}}
+
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
−
{{#set: common name=phi_class_glutathione_s-transferase}}
+
{{#set: ec number=EC-3.1.27.1}}
−
{{#set: ec number=EC-2.5.1.18}}
+
{{#set: gene associated=Tiso_gene_8896|Tiso_gene_13100|Tiso_gene_11979}}
−
{{#set: gene associated=Tiso_gene_19791|Tiso_gene_20110|Tiso_gene_6036|Tiso_gene_3535|Tiso_gene_1104|Tiso_gene_8508|Tiso_gene_19041|Tiso_gene_1666|Tiso_gene_8389|Tiso_gene_3233|Tiso_gene_8509|Tiso_gene_5129|Tiso_gene_2775}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY-6842|PWY-4061}}
+
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:42, 21 March 2018

Reaction 3.1.27.1-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • uncharacterized_protein
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Ubiquinones&oldid=35772"