Difference between revisions of "CPD-318"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R05068 R05068] == * direction: ** LEFT-TO-RIGHT * common name: ** R289 * Synonym(s): == Reaction F...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15127 RXN-15127] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R05068 R05068] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15127 RXN-15127] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
+
* ec number:
−
** R289
+
** [http://enzyme.expasy.org/EC/3.5.99.10 EC-3.5.99.10]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[NADPH]][c] '''+''' 1.0 [[PROTON]][c] '''+''' 1.0 [[CPD-15104]][c] '''=>''' 1.0 [[1-KETO-2-METHYLVALERATE]][c] '''+''' 1.0 [[NADP]][c]
+
** 1 [[CPD-16015]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 NADPH[c] '''+''' 1.0 H+[c] '''+''' 1.0 (R)-3-hydroxy-3-methyl-2-oxopentanoate[c] '''=>''' 1.0 (R)-2,3-dihydroxy-3-methylpentanoate[c] '''+''' 1.0 NADP+[c]
+
** 1 2-iminopropanoate[c] '''+''' 1 H2O[c] '''+''' 1 H+[c] '''=>''' 1 ammonium[c] '''+''' 1 pyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_10174]]
 
−
** [[pantograph]]-[[synechocystis]]
 
−
* [[Tiso_gene_10173]]
 
−
** [[pantograph]]-[[synechocystis]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY0-1535]], D-serine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1535 PWY0-1535]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[TRYPDEG-PWY]], L-tryptophan degradation II (via pyruvate): [http://metacyc.org/META/NEW-IMAGE?object=TRYPDEG-PWY TRYPDEG-PWY]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3661]], glycine betaine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661 PWY-3661]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[SERDEG-PWY]], L-serine degradation: [http://metacyc.org/META/NEW-IMAGE?object=SERDEG-PWY SERDEG-PWY]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
 +
** '''7''' reactions found over '''24''' reactions in the full pathway
 +
* [[LCYSDEG-PWY]], L-cysteine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=LCYSDEG-PWY LCYSDEG-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=R289}}
+
{{#set: ec number=EC-3.5.99.10}}
−
{{#set: gene associated=Tiso_gene_10174|Tiso_gene_10173}}
+
{{#set: in pathway=PWY0-1535|TRYPDEG-PWY|PWY-3661|SERDEG-PWY|PWY-5497|LCYSDEG-PWY}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
−
{{#set: reconstruction source=orthology-synechocystis}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph}}
+

Revision as of 15:47, 21 March 2018

Reaction RXN-15127

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-iminopropanoate[c] + 1 H2O[c] + 1 H+[c] => 1 ammonium[c] + 1 pyruvate[c]

Genes associated with this reaction

Pathways

  • PWY0-1535, D-serine degradation: PWY0-1535
    • 2 reactions found over 3 reactions in the full pathway
  • TRYPDEG-PWY, L-tryptophan degradation II (via pyruvate): TRYPDEG-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3661, glycine betaine degradation I: PWY-3661
    • 4 reactions found over 7 reactions in the full pathway
  • SERDEG-PWY, L-serine degradation: SERDEG-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5497, purine nucleobases degradation II (anaerobic): PWY-5497
    • 7 reactions found over 24 reactions in the full pathway
  • LCYSDEG-PWY, L-cysteine degradation II: LCYSDEG-PWY
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-318&oldid=36226"