Difference between revisions of "A-5-prime-PP-5-prime-RNA"

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(Created page with "Category:Gene == Gene Tiso_gene_11648 == * left end position: ** 626 * transcription direction: ** NEGATIVE * right end position: ** 5026 * centisome position: ** 8.191573...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16136 RXN-16136] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_11648 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16136 RXN-16136] ==
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* left end position:
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* direction:
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** 626
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** NEGATIVE
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** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
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* right end position:
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** 5026
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* centisome position:
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** 8.191573   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.6.3.1-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CPD-17387]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-17388]][c] '''+''' 1 [[NADH]][c]
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***ec-number
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 H+[c] '''+''' 1 3-oxo-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] '''+''' 1 NADH[c]
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* [[3.6.3.50-RXN]]
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
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* [[ATPASE-RXN]]
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== Pathways  ==
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** in-silico_annotation
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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***automated-name-match
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** '''14''' reactions found over '''14''' reactions in the full pathway
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** [[pantograph]]-[[athaliana]]
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== Reconstruction information  ==
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* [[PE1819Z1819Zt]]
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* Category: [[annotation]]
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=626}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-1.1.1}}
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{{#set: right end position=5026}}
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{{#set: in pathway=PWY-7606}}
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{{#set: centisome position=8.191573    }}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction associated=3.6.3.1-RXN|3.6.3.50-RXN|ATPASE-RXN|PE1819Z1819Zt}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:06, 21 March 2018

Reaction RXN-16136

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] + 1 NAD+[c] => 1 H+[c] + 1 3-oxo-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] + 1 NADH[c]

Genes associated with this reaction

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=A-5-prime-PP-5-prime-RNA&oldid=38749"