Difference between revisions of "Tiso gene 7315"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] == * direction: ** LEFT-...")
(Created page with "Category:Gene == Gene Tiso_gene_7315 == * right end position: ** 8200 * transcription direction: ** POSITIVE * left end position: ** 5084 * centisome position: ** 44.99115...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] ==
+
== Gene Tiso_gene_7315 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 8200
−
* common name:
+
* transcription direction:
−
** cryptochrome_photolyase_fad-binding_domain-containing_protein
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/4.1.99.3 EC-4.1.99.3]
+
** 5084
 +
* centisome position:
 +
** 44.99115   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
−
** 1 [[DNA-With-Pyrimidine-Dimers]][c] '''=>''' 1 [[DNA-Adjacent-Pyrimidines]][c]
+
−
* With common name(s):
+
−
**
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_15524]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_6546]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: ec-number
−
* Gene: [[Tiso_gene_6547]]
+
== Pathways associated ==
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_15525]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_16321]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_15196]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_6548]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
== Pathways ==
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: right end position=8200}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00034 R00034]
+
{{#set: transcription direction=POSITIVE}}
−
* UNIPROT:
+
{{#set: left end position=5084}}
−
** [http://www.uniprot.org/uniprot/P12769 P12769]
+
{{#set: centisome position=44.99115    }}
−
** [http://www.uniprot.org/uniprot/Q9JSP8 Q9JSP8]
+
{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
−
** [http://www.uniprot.org/uniprot/Q9HQ46 Q9HQ46]
+
−
** [http://www.uniprot.org/uniprot/P12768 P12768]
+
−
** [http://www.uniprot.org/uniprot/P27526 P27526]
+
−
** [http://www.uniprot.org/uniprot/P25078 P25078]
+
−
** [http://www.uniprot.org/uniprot/Q43125 Q43125]
+
−
** [http://www.uniprot.org/uniprot/P40115 P40115]
+
−
** [http://www.uniprot.org/uniprot/Q28811 Q28811]
+
−
** [http://www.uniprot.org/uniprot/Q24443 Q24443]
+
−
** [http://www.uniprot.org/uniprot/Q91186 Q91186]
+
−
** [http://www.uniprot.org/uniprot/Q42696 Q42696]
+
−
** [http://www.uniprot.org/uniprot/P05066 P05066]
+
−
** [http://www.uniprot.org/uniprot/O24020 O24020]
+
−
** [http://www.uniprot.org/uniprot/O24374 O24374]
+
−
** [http://www.uniprot.org/uniprot/P00914 P00914]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=cryptochrome_photolyase_fad-binding_domain-containing_protein}}
+
−
{{#set: ec number=EC-4.1.99.3}}
+
−
{{#set: gene associated=Tiso_gene_15524|Tiso_gene_6546|Tiso_gene_6547|Tiso_gene_15525|Tiso_gene_16321|Tiso_gene_15196|Tiso_gene_6548}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:09, 21 March 2018

Gene Tiso_gene_7315

  • right end position:
    • 8200
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5084
  • centisome position:
    • 44.99115
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7315&oldid=39829"