Difference between revisions of "RXN-1884"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14262 RXN-14262] == * direction: ** REVERSIBLE * common name: ** lauroyl-CoA dehydrogenase ** a...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1884 RXN-1884] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14262 RXN-14262] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1884 RXN-1884] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** lauroyl-CoA dehydrogenase
+
−
** acyl-coenzyme_a_oxidase
+
−
** acyl-_dehydrogenase
+
−
** ORF
+
−
** acyl-CoA_dehydrogenase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.8.7 EC-1.3.8.7]
+
** [http://enzyme.expasy.org/EC/1.1.1.316 EC-1.1.1.316]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[LAUROYLCOA-CPD]][c] '''<=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[CPD-7222]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[L-Galactopyranose]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-330]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''+''' 1 lauroyl-CoA[c] '''<=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 trans-dodec-2-enoyl-CoA[c]
+
** 1 NAD+[c] '''+''' 1 L-galactopyranose[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 L-galactono-1,4-lactone[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_6475]]
+
* Gene: [[Tiso_gene_14920]]
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
* Gene: [[Tiso_gene_5991]]
+
* Gene: [[Tiso_gene_14624]]
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_8272]]
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
* Gene: [[Tiso_gene_883]]
+
* Gene: [[Tiso_gene_18748]]
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_17967]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_16631]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_18566]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
* Gene: [[Tiso_gene_14511]]
+
* Gene: [[Tiso_gene_703]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_4219]]
 +
** Source: [[orthology-athaliana]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31040 31040]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31562 31562]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03857 R03857]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07675 R07675]
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=lauroyl-CoA dehydrogenase}}
+
{{#set: ec number=EC-1.1.1.316}}
−
{{#set: common name=acyl-coenzyme_a_oxidase}}
+
{{#set: gene associated=Tiso_gene_14920|Tiso_gene_14624|Tiso_gene_18748|Tiso_gene_703|Tiso_gene_4219}}
−
{{#set: common name=acyl-_dehydrogenase}}
+
{{#set: in pathway=PWY-882}}
−
{{#set: common name=ORF}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: common name=acyl-CoA_dehydrogenase}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
−
{{#set: ec number=EC-1.3.8.7}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: gene associated=Tiso_gene_6475|Tiso_gene_5991|Tiso_gene_8272|Tiso_gene_883|Tiso_gene_17967|Tiso_gene_16631|Tiso_gene_18566|Tiso_gene_14511}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:09, 21 March 2018

Reaction RXN-1884

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 L-galactopyranose[c] => 1 H+[c] + 1 NADH[c] + 1 L-galactono-1,4-lactone[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-882, L-ascorbate biosynthesis I (L-galactose pathway): PWY-882
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-1884&oldid=39846"