Difference between revisions of "Tiso gene 13030"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Gene == Gene Tiso_gene_13030 == * right end position: ** 2246 * transcription direction: ** POSITIVE * left end position: ** 192 * centisome position: ** 2.924600...")
 
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622] ==
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== Gene Tiso_gene_13030 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** 2246
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* common name:
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* transcription direction:
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** formaldehyde assimilation I (serine pathway)
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** POSITIVE
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* left end position:
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** 192
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* centisome position:
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** 2.9246001   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''5''' reactions found over '''13''' reactions in the full pathway
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* Reaction: [[GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN]]
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* [[2PGADEHYDRAT-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 4 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_8720]]
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* Reaction: [[RXN-17203]]
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*** [[Tiso_gene_14718]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_5619]]
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*** Assignment: ec-number
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*** [[Tiso_gene_13317]]
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* Reaction: [[RXN-18301]]
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** 7 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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*** [[orthology-esiliculosus]]
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* Reaction: [[RXN-18303]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: ec-number
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*** [[orthology-synechocystis]]
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== Pathways associated ==
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*** [[manual-primary_network]]
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* [[PWY-7840]]
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*** [[orthology-creinhardtii]]
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* [[GLYOHMETRANS-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_16153]]
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*** [[Tiso_gene_7776]]
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*** [[Tiso_gene_18652]]
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*** [[Tiso_gene_16154]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_2323]]
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*** [[Tiso_gene_1990]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[RXN-15513]]
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** 8 associated gene(s):
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*** [[Tiso_gene_7201]]
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*** [[Tiso_gene_14530]]
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*** [[Tiso_gene_16271]]
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*** [[Tiso_gene_9922]]
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*** [[Tiso_gene_2841]]
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*** [[Tiso_gene_2365]]
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*** [[Tiso_gene_14664]]
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*** [[Tiso_gene_9923]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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* [[RXN-2881]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=GKI-RXN GKI-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYPYRUVATE-REDUCTASE-RXN HYDROXYPYRUVATE-REDUCTASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=MALATE--COA-LIGASE-RXN MALATE--COA-LIGASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=MALYL-COA-LYASE-RXN MALYL-COA-LYASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2802 RXN-2802]
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* [http://metacyc.org/META/NEW-IMAGE?object=SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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{{#set: right end position=2246}}
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{{#set: common name=formaldehyde assimilation I (serine pathway)}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: reaction found=5}}
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{{#set: left end position=192}}
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{{#set: total reaction=13}}
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{{#set: centisome position=2.9246001    }}
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{{#set: completion rate=38.0}}
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{{#set: reaction associated=GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN|RXN-17203|RXN-18301|RXN-18303}}
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{{#set: pathway associated=PWY-7840}}

Latest revision as of 19:20, 21 March 2018

Gene Tiso_gene_13030

  • right end position:
    • 2246
  • transcription direction:
    • POSITIVE
  • left end position:
    • 192
  • centisome position:
    • 2.9246001
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13030&oldid=41003"