Difference between revisions of "PWY-5123"

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(Created page with "Category:Gene == Gene Tiso_gene_19961 == * right end position: ** 1487 * transcription direction: ** NEGATIVE * left end position: ** 51 * centisome position: ** 2.7055702...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5123 PWY-5123] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
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[[Category:Gene]]
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[[Category:Pathway]]
== Gene Tiso_gene_19961 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5123 PWY-5123] ==
* right end position:
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* taxonomic range:
** 1487
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
** NEGATIVE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
* left end position:
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* common name:
** 51
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** trans, trans-farnesyl diphosphate biosynthesis
* centisome position:
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** 2.7055702   
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* Synonym(s):
 
* Synonym(s):
 +
** FPP biosynthesis
 +
** trans, trans-farnesyl diphosphate biosynthesis
  
== Reactions associated ==
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== Reaction(s) found ==
* Reaction: [[TRIOSEPISOMERIZATION-RXN]]
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'''3''' reactions found over '''3''' reactions in the full pathway
** Source: [[annotation-in-silico_annotation]]
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* [[FPPSYN-RXN]]
*** Assignment: ec-number
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** 1 associated gene(s):
** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_16284]]
*** Assignment: ec-number
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** 4 reconstruction source(s) associated:
** Source: [[orthology-athaliana]]
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*** [[orthology-athaliana]]
** Source: [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
** Source: [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
** Source: [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
** Source: [[orthology-creinhardtii]]
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* [[GPPSYN-RXN]]
== Pathways associated ==
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** 9 associated gene(s):
* [[PWY-1042]]
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*** [[Tiso_gene_19542]]
* [[P341-PWY]]
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*** [[Tiso_gene_18201]]
* [[PWY66-399]]
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*** [[Tiso_gene_16284]]
* [[P185-PWY]]
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*** [[Tiso_gene_2848]]
* [[GLUCONEO-PWY]]
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*** [[Tiso_gene_1035]]
* [[GLYCOLYSIS]]
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*** [[Tiso_gene_4719]]
* [[PWY-6142]]
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*** [[Tiso_gene_11582]]
* [[CALVIN-PWY]]
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*** [[Tiso_gene_13582]]
* [[ANAGLYCOLYSIS-PWY]]
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*** [[Tiso_gene_10317]]
* [[PWY-5484]]
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** 5 reconstruction source(s) associated:
* [[PWY66-373]]
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*** [[orthology-athaliana]]
* [[PWY-7003]]
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*** [[orthology-creinhardtii]]
 +
*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
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* [[IPPISOM-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_8653]]
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** 2 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
{{#set: right end position=1487}}
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* ECOCYC:
{{#set: transcription direction=NEGATIVE}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5123 PWY-5123]
{{#set: left end position=51}}
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* ARACYC:
{{#set: centisome position=2.7055702    }}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5123 PWY-5123]
{{#set: reaction associated=TRIOSEPISOMERIZATION-RXN}}
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{{#set: taxonomic range=TAX-2157}}
{{#set: pathway associated=PWY-1042|P341-PWY|PWY66-399|P185-PWY|GLUCONEO-PWY|GLYCOLYSIS|PWY-6142|CALVIN-PWY|ANAGLYCOLYSIS-PWY|PWY-5484|PWY66-373|PWY-7003}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=trans, trans-farnesyl diphosphate biosynthesis}}
 +
{{#set: common name=FPP biosynthesis|trans, trans-farnesyl diphosphate biosynthesis}}
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{{#set: reaction found=3}}
 +
{{#set: total reaction=3}}
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{{#set: completion rate=100.0}}

Latest revision as of 19:28, 21 March 2018

Pathway PWY-5123

  • taxonomic range:
  • common name:
    • trans, trans-farnesyl diphosphate biosynthesis
  • Synonym(s):
    • FPP biosynthesis
    • trans, trans-farnesyl diphosphate biosynthesis

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links