Difference between revisions of "RXN-14223"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_13557 == * Synonym(s): == Reactions associated == * Reaction: TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN ** Source: annotation-in-silico_anno...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14223 RXN-14223] == * direction: ** REVERSIBLE * common name: ** ORF ** at1g17160 ** ribokinase...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14223 RXN-14223] == |
| + | * direction: | ||
| + | ** REVERSIBLE | ||
| + | * common name: | ||
| + | ** ORF | ||
| + | ** at1g17160 | ||
| + | ** ribokinase | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.7.1.15 EC-2.7.1.15] | ||
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| + | ** 1 [[ATP]][c] '''+''' 1 [[2-DEOXYRIBOSE]][c] '''<=>''' 1 [[DEOXY-RIBOSE-5P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] | ||
| + | * With common name(s): | ||
| + | ** 1 ATP[c] '''+''' 1 2'-deoxyribose[c] '''<=>''' 1 2-deoxy-D-ribose 5-phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_911]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** Assignment: | + | *** Assignment: EC-NUMBER |
| + | * Gene: [[Tiso_gene_17974]] | ||
** Source: [[orthology-esiliculosus]] | ** Source: [[orthology-esiliculosus]] | ||
| − | == Pathways | + | * Gene: [[Tiso_gene_81]] |
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_18204]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_82]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_7682]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | == Pathways == | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30874 30874] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R02750 R02750] | ||
| + | {{#set: direction=REVERSIBLE}} | ||
| + | {{#set: common name=ORF}} | ||
| + | {{#set: common name=at1g17160}} | ||
| + | {{#set: common name=ribokinase}} | ||
| + | {{#set: ec number=EC-2.7.1.15}} | ||
| + | {{#set: gene associated=Tiso_gene_911|Tiso_gene_17974|Tiso_gene_81|Tiso_gene_18204|Tiso_gene_82|Tiso_gene_7682}} | ||
| + | {{#set: in pathway=}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 19:39, 21 March 2018
Contents
Reaction RXN-14223
- direction:
- REVERSIBLE
- common name:
- ORF
- at1g17160
- ribokinase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ATP[c] + 1 2-DEOXYRIBOSE[c] <=> 1 DEOXY-RIBOSE-5P[c] + 1 PROTON[c] + 1 ADP[c]
- With common name(s):
- 1 ATP[c] + 1 2'-deoxyribose[c] <=> 1 2-deoxy-D-ribose 5-phosphate[c] + 1 H+[c] + 1 ADP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_911
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_17974
- Source: orthology-esiliculosus
- Gene: Tiso_gene_81
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_18204
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_82
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_7682
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links
