Difference between revisions of "PGLUCISOM-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13912 CPD-13912] == * smiles: ** C(C(C(O)C(C([O-])=O)(C([O-])=O)O)O)O * common name: ** 2-c...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLUCISOM-RXN PGLUCISOM-RXN] == * direction: ** REVERSIBLE * common name: ** glucose-6-phosphate_is...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13912 CPD-13912] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLUCISOM-RXN PGLUCISOM-RXN] ==
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* smiles:
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* direction:
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** C(C(C(O)C(C([O-])=O)(C([O-])=O)O)O)O
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** REVERSIBLE
 
* common name:
 
* common name:
−
** 2-carboxy-L-threo-pentonate
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** glucose-6-phosphate_isomerase
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* inchi key:
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* ec number:
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** InChIKey=CQIRJDZGDXTXKF-UHFFFAOYSA-L
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** [http://enzyme.expasy.org/EC/5.3.1.9 EC-5.3.1.9]
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* molecular weight:
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** 208.124   
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* Synonym(s):
 
* Synonym(s):
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** 2-carboxy-L-xylonate
 
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** 2-hydroxy-2-(1,2,3-trihydroxypropyl)propanedioate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-12871]]
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** 1 [[D-glucopyranose-6-phosphate]][c] '''<=>''' 1 [[FRUCTOSE-6P]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
 +
** 1 D-glucopyranose 6-phosphate[c] '''<=>''' 1 &beta;-D-fructofuranose 6-phosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_19480]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
 +
** '''12''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-3801]], sucrose degradation II (sucrose synthase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
 +
** '''11''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
 +
** '''8''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-5659]], GDP-mannose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5659 PWY-5659]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6981]], chitin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6981 PWY-6981]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[P341-PWY]], glycolysis V (Pyrococcus): [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7347]], sucrose biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7347 PWY-7347]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
* [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[UDPNAGSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=UDPNAGSYN-PWY UDPNAGSYN-PWY]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-622]], starch biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-622 PWY-622]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5054]], sorbitol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5054 PWY-5054]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6992]], 1,5-anhydrofructose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6992 PWY-6992]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5384 PWY-5384]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5514 PWY-5514]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
 +
** '''14''' reactions found over '''18''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
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* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657336 90657336]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11816 11816]
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{{#set: smiles=C(C(C(O)C(C([O-])=O)(C([O-])=O)O)O)O}}
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* LIGAND-RXN:
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{{#set: common name=2-carboxy-L-threo-pentonate}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00771 R00771]
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{{#set: inchi key=InChIKey=CQIRJDZGDXTXKF-UHFFFAOYSA-L}}
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* UNIPROT:
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{{#set: molecular weight=208.124    }}
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** [http://www.uniprot.org/uniprot/P06744 P06744]
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{{#set: common name=2-carboxy-L-xylonate|2-hydroxy-2-(1,2,3-trihydroxypropyl)propanedioate}}
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** [http://www.uniprot.org/uniprot/P28718 P28718]
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{{#set: produced by=RXN-12871}}
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** [http://www.uniprot.org/uniprot/Q7LZP0 Q7LZP0]
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** [http://www.uniprot.org/uniprot/O83488 O83488]
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** [http://www.uniprot.org/uniprot/Q9JTW1 Q9JTW1]
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** [http://www.uniprot.org/uniprot/Q59000 Q59000]
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** [http://www.uniprot.org/uniprot/Q9PMD4 Q9PMD4]
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** [http://www.uniprot.org/uniprot/O25781 O25781]
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** [http://www.uniprot.org/uniprot/O84382 O84382]
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** [http://www.uniprot.org/uniprot/Q9JSS6 Q9JSS6]
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** [http://www.uniprot.org/uniprot/P81181 P81181]
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** [http://www.uniprot.org/uniprot/P08059 P08059]
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** [http://www.uniprot.org/uniprot/P50309 P50309]
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** [http://www.uniprot.org/uniprot/P13376 P13376]
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** [http://www.uniprot.org/uniprot/P13375 P13375]
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** [http://www.uniprot.org/uniprot/P12709 P12709]
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** [http://www.uniprot.org/uniprot/P0A6T1 P0A6T1]
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** [http://www.uniprot.org/uniprot/P06745 P06745]
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** [http://www.uniprot.org/uniprot/P13377 P13377]
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** [http://www.uniprot.org/uniprot/P12341 P12341]
 +
** [http://www.uniprot.org/uniprot/P18240 P18240]
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** [http://www.uniprot.org/uniprot/P29333 P29333]
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** [http://www.uniprot.org/uniprot/P34796 P34796]
 +
** [http://www.uniprot.org/uniprot/P34797 P34797]
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** [http://www.uniprot.org/uniprot/P54240 P54240]
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** [http://www.uniprot.org/uniprot/P54242 P54242]
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** [http://www.uniprot.org/uniprot/Q59088 Q59088]
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** [http://www.uniprot.org/uniprot/P78033 P78033]
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** [http://www.uniprot.org/uniprot/P52983 P52983]
 +
** [http://www.uniprot.org/uniprot/P49105 P49105]
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** [http://www.uniprot.org/uniprot/P42862 P42862]
 +
** [http://www.uniprot.org/uniprot/P42863 P42863]
 +
** [http://www.uniprot.org/uniprot/Q9SB57 Q9SB57]
 +
** [http://www.uniprot.org/uniprot/O82058 O82058]
 +
** [http://www.uniprot.org/uniprot/O82059 O82059]
 +
** [http://www.uniprot.org/uniprot/O61113 O61113]
 +
** [http://www.uniprot.org/uniprot/P78917 P78917]
 +
** [http://www.uniprot.org/uniprot/Q9RMC1 Q9RMC1]
 +
** [http://www.uniprot.org/uniprot/Q9X670 Q9X670]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=glucose-6-phosphate_isomerase}}
 +
{{#set: ec number=EC-5.3.1.9}}
 +
{{#set: gene associated=Tiso_gene_19480}}
 +
{{#set: in pathway=RUMP-PWY|GLYCOLYSIS|PWY-3801|PWY-7385|P124-PWY|PWY-6142|PWY-5659|PWY-6981|P341-PWY|GLUCONEO-PWY|PWY-7347|PWY66-399|SUCSYN-PWY|UDPNAGSYN-PWY|PWY-621|PWY-622|PWY-5054|PWY-6992|ANAGLYCOLYSIS-PWY|PWY-5384|PWY-7238|PWY-5514|P122-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:46, 21 March 2018

Reaction PGLUCISOM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • glucose-6-phosphate_isomerase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • RUMP-PWY, formaldehyde oxidation I: RUMP-PWY
    • 3 reactions found over 6 reactions in the full pathway
  • GLYCOLYSIS, glycolysis I (from glucose 6-phosphate): GLYCOLYSIS
    • 12 reactions found over 12 reactions in the full pathway
  • PWY-3801, sucrose degradation II (sucrose synthase): PWY-3801
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7385, 1,3-propanediol biosynthesis (engineered): PWY-7385
    • 5 reactions found over 9 reactions in the full pathway
  • P124-PWY, Bifidobacterium shunt: P124-PWY
    • 11 reactions found over 15 reactions in the full pathway
  • PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum): PWY-6142
    • 8 reactions found over 14 reactions in the full pathway
  • PWY-5659, GDP-mannose biosynthesis: PWY-5659
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6981, chitin biosynthesis: PWY-6981
    • 4 reactions found over 8 reactions in the full pathway
  • P341-PWY, glycolysis V (Pyrococcus): P341-PWY
    • 6 reactions found over 9 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY-7347, sucrose biosynthesis III: PWY-7347
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-399, gluconeogenesis III: PWY66-399
    • 10 reactions found over 12 reactions in the full pathway
  • SUCSYN-PWY, sucrose biosynthesis I (from photosynthesis): SUCSYN-PWY
    • 7 reactions found over 9 reactions in the full pathway
  • UDPNAGSYN-PWY, UDP-N-acetyl-D-glucosamine biosynthesis I: UDPNAGSYN-PWY
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-621, sucrose degradation III (sucrose invertase): PWY-621
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-622, starch biosynthesis: PWY-622
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5054, sorbitol biosynthesis I: PWY-5054
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6992, 1,5-anhydrofructose degradation: PWY-6992
    • 3 reactions found over 5 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY, glycolysis III (from glucose): ANAGLYCOLYSIS-PWY
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-5384, sucrose degradation IV (sucrose phosphorylase): PWY-5384
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7238, sucrose biosynthesis II: PWY-7238
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-5514, UDP-N-acetyl-D-galactosamine biosynthesis II: PWY-5514
    • 5 reactions found over 7 reactions in the full pathway
  • P122-PWY, heterolactic fermentation: P122-PWY
    • 14 reactions found over 18 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PGLUCISOM-RXN&oldid=43618"