Difference between revisions of "Tiso gene 10320"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15212 RXN-15212] == * direction: ** LEFT-TO-RIGHT * common name: ** sphingomyelinase * ec numbe...")
(Created page with "Category:Gene == Gene Tiso_gene_10320 == * right end position: ** 1677 * transcription direction: ** POSITIVE * left end position: ** 3 * centisome position: ** 3.47262440...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15212 RXN-15212] ==
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== Gene Tiso_gene_10320 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1677
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* common name:
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* transcription direction:
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** sphingomyelinase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.1.4.12 EC-3.1.4.12]
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** 3
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* centisome position:
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** 3.472624400e-2
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-12610]]
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** 1 [[N-acyl-sphingosylphosphorylcholine]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[N-Acylsphingosine]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PHOSPHORYL-CHOLINE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 an N-acyl-sphingosylphosphorylcholine[c] '''+''' 1 H2O[c] '''=>''' 1 a sphingosine ceramide[c] '''+''' 1 H+[c] '''+''' 1 phosphocholine[c]
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* Reaction: [[RXN-12611]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_12644]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[THI-P-SYN-RXN]]
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* [[PWY-7277]], sphingolipid biosynthesis (mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7277 PWY-7277]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY3DJ-11281]], sphingomyelin metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-11281 PWY3DJ-11281]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6907]]
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* [[PWY-6908]]
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* [[PWY-7357]]
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* [[PWY-6894]]
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* [[PWY-6897]]
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* [[PWY-7356]]
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* [[PWY-6893]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1677}}
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{{#set: common name=sphingomyelinase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-3.1.4.12}}
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{{#set: left end position=3}}
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{{#set: gene associated=Tiso_gene_12644}}
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{{#set: centisome position=3.472624400e-2}}
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{{#set: in pathway=PWY-7277|PWY3DJ-11281}}
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{{#set: reaction associated=RXN-12610|RXN-12611|THI-P-SYN-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-6907|PWY-6908|PWY-7357|PWY-6894|PWY-6897|PWY-7356|PWY-6893}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:53, 21 March 2018

Gene Tiso_gene_10320

  • right end position:
    • 1677
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3
  • centisome position:
    • 3.472624400e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10320&oldid=44429"