Difference between revisions of "RXN-2562"

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(Created page with "Category:Gene == Gene Tiso_gene_12601 == * Synonym(s): == Reactions associated == * 3.1.3.57-RXN ** pantograph-athaliana * 325-BISPHOSPHATE-NUCLEOTIDASE-RXN...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLMETHIONINE-DEFORMYLASE-RXN FORMYLMETHIONINE-DEFORMYLASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_12601 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLMETHIONINE-DEFORMYLASE-RXN FORMYLMETHIONINE-DEFORMYLASE-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
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** polypeptide_deformylase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.1.31 EC-3.5.1.31]
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[3.1.3.57-RXN]]
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* With identifiers:
** [[pantograph]]-[[athaliana]]
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** 1 [[N-FORMYLMETHIONINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[MET]][c]
* [[325-BISPHOSPHATE-NUCLEOTIDASE-RXN]]
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* With common name(s):
** [[pantograph]]-[[creinhardtii]]
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** 1 N-formyl-L-methionine[c] '''+''' 1 H2O[c] '''=>''' 1 formate[c] '''+''' 1 L-methionine[c]
* [[MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN]]
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
* [[R163-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_14998]]
** [[pantograph]]-[[esiliculosus]]
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** IN-SILICO_ANNOTATION
** [[pantograph]]-[[creinhardtii]]
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***AUTOMATED-NAME-MATCH
* [[RXN-10939]]
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== Pathways ==
** [[pantograph]]-[[athaliana]]
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== Reconstruction information  ==
** [[pantograph]]-[[esiliculosus]]
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* [[annotation]]:
* [[RXN0-5408]]
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** [[pathwaytools]]:
** [[pantograph]]-[[esiliculosus]]
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*** [[in-silico_annotation]]
== Pathways associated ==
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* [[PWY-4702]]
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* [[PWY-2301]]
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* [[PWY-6363]]
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== External links  ==
 
== External links  ==
{{#set: reaction associated=3.1.3.57-RXN|325-BISPHOSPHATE-NUCLEOTIDASE-RXN|MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN|R163-RXN|RXN-10939|RXN0-5408}}
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* RHEA:
{{#set: pathway associated=PWY-4702|PWY-2301|PWY-6363}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17781 17781]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00653 R00653]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P63916 P63916]
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** [http://www.uniprot.org/uniprot/Q9PIT8 Q9PIT8]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=polypeptide_deformylase}}
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{{#set: ec number=EC-3.5.1.31}}
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{{#set: gene associated=Tiso_gene_14998}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:28, 10 January 2018

Reaction FORMYLMETHIONINE-DEFORMYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polypeptide_deformylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 N-formyl-L-methionine[c] + 1 H2O[c] => 1 formate[c] + 1 L-methionine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links