Difference between revisions of "Tiso gene 16805"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7922 RXN-7922] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Gene == Gene Tiso_gene_16805 == * right end position: ** 1883 * transcription direction: ** POSITIVE * left end position: ** 531 * centisome position: ** 12.91656...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7922 RXN-7922] ==
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== Gene Tiso_gene_16805 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1883
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.11.9 EC-1.14.11.9]
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** POSITIVE
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* left end position:
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** 531
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* centisome position:
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** 12.916565   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CHOLINE-KINASE-RXN]]
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** 1 [[CPD-7214]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-7087]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 (2S)-dihydrotricetin[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 (+)-dihydromyricetin[c] '''+''' 1 succinate[c] '''+''' 1 CO2[c]
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== Pathways associated ==
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* [[PWY-7782]]
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== Genes associated with this reaction  ==
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* [[PWY3O-450]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7818]]
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* Gene: [[Tiso_gene_3330]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[PWY-5152]], leucodelphinidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5152 PWY-5152]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=1883}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05039 R05039]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=531}}
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{{#set: ec number=EC-1.14.11.9}}
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{{#set: centisome position=12.916565    }}
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{{#set: gene associated=Tiso_gene_3330}}
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{{#set: reaction associated=CHOLINE-KINASE-RXN}}
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{{#set: in pathway=PWY-5152}}
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{{#set: pathway associated=PWY-7782|PWY3O-450|PWY-7818}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:19, 21 March 2018

Gene Tiso_gene_16805

  • right end position:
    • 1883
  • transcription direction:
    • POSITIVE
  • left end position:
    • 531
  • centisome position:
    • 12.916565
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16805&oldid=47726"