Difference between revisions of "RXN66-577"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_13518 == * right end position: ** 1906 * transcription direction: ** NEGATIVE * left end position: ** 2 * centisome position: ** 3.20307500...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-577 RXN66-577] == * direction: ** LEFT-TO-RIGHT * common name: ** sarcosine_dehydrogenase * e...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-577 RXN66-577] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** sarcosine_dehydrogenase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/1.5.8 EC-1.5.8] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| + | ** 1 [[SARCOSINE]][c] '''+''' 2 [[ETF-Oxidized]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[THF-GLU-N]][c] '''=>''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 2 [[ETF-Reduced]][c] '''+''' 1 [[GLY]][c] | ||
| + | * With common name(s): | ||
| + | ** 1 sarcosine[c] '''+''' 2 an oxidized electron-transfer flavoprotein[c] '''+''' 3 H+[c] '''+''' 1 a tetrahydrofolate[c] '''=>''' 1 a 5,10-methenyltetrahydrofolate[c] '''+''' 2 a reduced electron-transfer flavoprotein[c] '''+''' 1 glycine[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_14788]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | == Pathways == | ||
| + | * [[PWY-3661-1]], glycine betaine degradation II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661-1 PWY-3661-1] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** | + | *** Tool: [[pathwaytools]] |
| − | + | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=sarcosine_dehydrogenase}} |
| − | {{#set: | + | {{#set: ec number=EC-1.5.8}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_14788}} |
| − | {{#set: | + | {{#set: in pathway=PWY-3661-1}} |
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 20:19, 21 March 2018
Contents
Reaction RXN66-577
- direction:
- LEFT-TO-RIGHT
- common name:
- sarcosine_dehydrogenase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 SARCOSINE[c] + 2 ETF-Oxidized[c] + 3 PROTON[c] + 1 THF-GLU-N[c] => 1 5-10-METHENYL-THF-GLU-N[c] + 2 ETF-Reduced[c] + 1 GLY[c]
- With common name(s):
- 1 sarcosine[c] + 2 an oxidized electron-transfer flavoprotein[c] + 3 H+[c] + 1 a tetrahydrofolate[c] => 1 a 5,10-methenyltetrahydrofolate[c] + 2 a reduced electron-transfer flavoprotein[c] + 1 glycine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_14788
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
- PWY-3661-1, glycine betaine degradation II (mammalian): PWY-3661-1
- 3 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
