Difference between revisions of "RXN1F-147"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7682 RXN-7682] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-147 RXN1F-147] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7682 RXN-7682] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-147 RXN1F-147] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.17.1.4 EC-1.17.1.4]
+
** [http://enzyme.expasy.org/EC/5.5.1.18 EC-5.5.1.18]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[HYPOXANTHINE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[XANTHINE]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[CPD1F-114]][c] '''=>''' 1 [[CPD1F-115]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 hypoxanthine[c] '''+''' 1 NAD+[c] '''=>''' 1 H+[c] '''+''' 1 xanthine[c] '''+''' 1 NADH[c]
+
** 1 all-trans-lycopene[c] '''=>''' 1 δ-carotene[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_11775]]
+
* Gene: [[Tiso_gene_11980]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_8263]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6282]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_3577]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_1547]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_4457]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
+
* [[PWY-5946]], δ-carotene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5946 PWY-5946]
−
** '''4''' reactions found over '''17''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
+
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
−
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
+
** Source: [[orthology-creinhardtii]]
−
** Source: [[annotation-in-silico_annotation]]
+
*** Tool: [[pantograph]]
−
*** Tool: [[pathwaytools]]
+
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24670 24670]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01768 R01768]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06963 R06963]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.17.1.4}}
+
{{#set: ec number=EC-5.5.1.18}}
−
{{#set: gene associated=Tiso_gene_11775}}
+
{{#set: gene associated=Tiso_gene_11980|Tiso_gene_8263|Tiso_gene_6282|Tiso_gene_3577|Tiso_gene_1547|Tiso_gene_4457}}
−
{{#set: in pathway=P164-PWY|PWY-6596|SALVADEHYPOX-PWY}}
+
{{#set: in pathway=PWY-5946}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:22, 21 March 2018

Reaction RXN1F-147

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-lycopene[c] => 1 δ-carotene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5946, δ-carotene biosynthesis: PWY-5946
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN1F-147&oldid=48176"