Difference between revisions of "RXN0-2044"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-5170 CPD-5170] == * common name: ** α-D-Glc-(1→3)-α-D-Glc-(1→3)-&alph...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2044 RXN0-2044] == * direction: ** REVERSIBLE * common name: ** hydroxyacyl-coenzyme_a_dehydro...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-5170 CPD-5170] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2044 RXN0-2044] ==
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* direction:
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** REVERSIBLE
 
* common name:
 
* common name:
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** α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol
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** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
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** 3-hydroxyacyl-_dehydrogenase
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** hydroxyacyl-coenzyme_a_mitochondrial
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
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** an {α-D-glucosyl-(1->3)-α-D-glucosyl-(1->3)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol
 
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** {α-D-glucosyl-(1->3)-α-D-glucosyl-(1->3)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol
 
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** a (glucosyl)2(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-5472]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[3-HYDROXYADIPYL-COA]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[3-KETO-ADIPYL-COA]][c]
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* [[RXN-5471]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 (3S)-hydroxyadipyl-CoA[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 3-oxoadipyl-CoA[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_18839]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_14027]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14262]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5857]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14026]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_18838]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-1361]], benzoyl-CoA degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1361 PWY-1361]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY0-321]], phenylacetate degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-321 PWY0-321]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=&alpha;-D-Glc-(1&rarr;3)-&alpha;-D-Glc-(1&rarr;3)-&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;3)-[&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;3)-[&alpha;-D-Man-(1&rarr;2)-&alpha;-D-Man-(1&rarr;6)]-&alpha;-D-Man-(1&rarr;6)]-&beta;-D-Man-(1&rarr;4)-&beta;-D-GlcNAc-(1&rarr;4)-&alpha;-D-GlcNAc-diphosphodolichol}}
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* RHEA:
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{{#set: common name=an {&alpha;-D-glucosyl-(1->3)-&alpha;-D-glucosyl-(1->3)-&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1,6)]-&alpha;-D-mannosyl-(1,6)]-&beta;-D-mannosyl-(1->4)-N-acetyl-&beta;-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol|{&alpha;-D-glucosyl-(1->3)-&alpha;-D-glucosyl-(1->3)-&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1,6)]-&alpha;-D-mannosyl-(1,6)]-&beta;-D-mannosyl-(1->4)-N-acetyl-&beta;-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol|a (glucosyl)2(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34851 34851]
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{{#set: consumed by=RXN-5472}}
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* LIGAND-RXN:
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{{#set: produced by=RXN-5471}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06941 R06941]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
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{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
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{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: gene associated=Tiso_gene_18839|Tiso_gene_14027|Tiso_gene_14262|Tiso_gene_5857|Tiso_gene_14026|Tiso_gene_18838}}
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{{#set: in pathway=PWY-1361|PWY0-321}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:24, 21 March 2018

Reaction RXN0-2044

  • direction:
    • REVERSIBLE
  • common name:
    • hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
    • 3-hydroxyacyl-_dehydrogenase
    • hydroxyacyl-coenzyme_a_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1361, benzoyl-CoA degradation I (aerobic): PWY-1361
    • 2 reactions found over 7 reactions in the full pathway
  • PWY0-321, phenylacetate degradation I (aerobic): PWY0-321
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-2044&oldid=48510"