Difference between revisions of "CPD-19158"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.2.21-RXN 3.1.2.21-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=S-ADENMETSYN-RXN S-ADENMETSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** S-adenosylmet...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=S-ADENMETSYN-RXN S-ADENMETSYN-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
+ | * common name: | ||
+ | ** S-adenosylmethionine synthase 1 | ||
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.5.1.6 EC-2.5.1.6] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[WATER]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PPI]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 H2O[c] '''+''' 1 L-methionine[c] '''+''' 1 ATP[c] '''=>''' 1 S-adenosyl-L-methionine[c] '''+''' 1 phosphate[c] '''+''' 1 diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[Tiso_gene_13443]] | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** [[pantograph]]-[[athaliana]] | ||
+ | ** [[pantograph]]-[[synechocystis]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | ** [[pantograph]]-[[creinhardtii]] | ||
== Pathways == | == Pathways == | ||
− | * [[ | + | * [[SAM-PWY]], S-adenosyl-L-methionine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SAM-PWY SAM-PWY] |
− | ** ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
− | * [[ | + | * [[METHIONINE-DEG1-PWY]], L-methionine degradation I (to L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE-DEG1-PWY METHIONINE-DEG1-PWY] |
− | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
+ | * [[ETHYL-PWY]], ethylene biosynthesis I (plants): [http://metacyc.org/META/NEW-IMAGE?object=ETHYL-PWY ETHYL-PWY] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5912]], 2'-deoxymugineic acid phytosiderophore biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5912 PWY-5912] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5041]], S-adenosyl-L-methionine cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * [[ | + | * [[orthology]]: |
− | ** [[ | + | ** [[pantograph]]: |
− | *** [[ | + | *** [[creinhardtii]] |
+ | *** [[synechocystis]] | ||
+ | *** [[esiliculosus]] | ||
+ | *** [[athaliana]] | ||
+ | * [[manual]]: | ||
+ | ** [[primary_network]] | ||
+ | * [[annotation]]: | ||
+ | ** [[pathwaytools]]: | ||
+ | *** [[experimental_annotation]] | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21080 21080] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00177 R00177] |
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P19358 P19358] | ||
+ | ** [http://www.uniprot.org/uniprot/P18298 P18298] | ||
+ | ** [http://www.uniprot.org/uniprot/Q91X83 Q91X83] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PNJ8 Q9PNJ8] | ||
+ | ** [http://www.uniprot.org/uniprot/P54419 P54419] | ||
+ | ** [http://www.uniprot.org/uniprot/P56460 P56460] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JVV6 Q9JVV6] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CEE0 Q9CEE0] | ||
+ | ** [http://www.uniprot.org/uniprot/O50163 O50163] | ||
+ | ** [http://www.uniprot.org/uniprot/P43762 P43762] | ||
+ | ** [http://www.uniprot.org/uniprot/P23686 P23686] | ||
+ | ** [http://www.uniprot.org/uniprot/P17562 P17562] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M4Y8 Q7M4Y8] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9S992 Q9S992] | ||
+ | ** [http://www.uniprot.org/uniprot/Q90862 Q90862] | ||
+ | ** [http://www.uniprot.org/uniprot/P13444 P13444] | ||
+ | ** [http://www.uniprot.org/uniprot/P31153 P31153] | ||
+ | ** [http://www.uniprot.org/uniprot/Q00266 Q00266] | ||
+ | ** [http://www.uniprot.org/uniprot/P43281 P43281] | ||
+ | ** [http://www.uniprot.org/uniprot/P40320 P40320] | ||
+ | ** [http://www.uniprot.org/uniprot/P43280 P43280] | ||
+ | ** [http://www.uniprot.org/uniprot/P43282 P43282] | ||
+ | ** [http://www.uniprot.org/uniprot/P48498 P48498] | ||
+ | ** [http://www.uniprot.org/uniprot/P10659 P10659] | ||
+ | ** [http://www.uniprot.org/uniprot/Q39465 Q39465] | ||
+ | ** [http://www.uniprot.org/uniprot/P48466 P48466] | ||
+ | ** [http://www.uniprot.org/uniprot/P49612 P49612] | ||
+ | ** [http://www.uniprot.org/uniprot/P49613 P49613] | ||
+ | ** [http://www.uniprot.org/uniprot/P78003 P78003] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49070 Q49070] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A817 P0A817] | ||
+ | ** [http://www.uniprot.org/uniprot/P50299 P50299] | ||
+ | ** [http://www.uniprot.org/uniprot/O22350 O22350] | ||
+ | ** [http://www.uniprot.org/uniprot/P24260 P24260] | ||
+ | ** [http://www.uniprot.org/uniprot/O60198 O60198] | ||
+ | ** [http://www.uniprot.org/uniprot/Q12642 Q12642] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: ec number=EC- | + | {{#set: common name=S-adenosylmethionine synthase 1}} |
− | {{#set: in pathway=PWY- | + | {{#set: ec number=EC-2.5.1.6}} |
− | {{#set: reconstruction category= | + | {{#set: gene associated=Tiso_gene_13443}} |
− | {{#set: reconstruction tool= | + | {{#set: in pathway=SAM-PWY|METHIONINE-DEG1-PWY|ETHYL-PWY|PWY-5912|PWY-5041}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction category=orthology}} |
+ | {{#set: reconstruction tool=pantograph}} | ||
+ | {{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}} | ||
+ | {{#set: reconstruction category=manual}} | ||
+ | {{#set: reconstruction source=primary_network}} | ||
+ | {{#set: reconstruction category=annotation}} | ||
+ | {{#set: reconstruction tool=pathwaytools}} | ||
+ | {{#set: reconstruction source=experimental_annotation}} |
Revision as of 16:44, 10 January 2018
Contents
Reaction S-ADENMETSYN-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- S-adenosylmethionine synthase 1
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 H2O[c] + 1 L-methionine[c] + 1 ATP[c] => 1 S-adenosyl-L-methionine[c] + 1 phosphate[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_13443
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-athaliana
- pantograph-synechocystis
- pantograph-esiliculosus
- pantograph-creinhardtii
- EXPERIMENTAL_ANNOTATION
Pathways
- SAM-PWY, S-adenosyl-L-methionine biosynthesis: SAM-PWY
- 1 reactions found over 1 reactions in the full pathway
- METHIONINE-DEG1-PWY, L-methionine degradation I (to L-homocysteine): METHIONINE-DEG1-PWY
- 3 reactions found over 3 reactions in the full pathway
- ETHYL-PWY, ethylene biosynthesis I (plants): ETHYL-PWY
- 2 reactions found over 3 reactions in the full pathway
- PWY-5912, 2'-deoxymugineic acid phytosiderophore biosynthesis: PWY-5912
- 1 reactions found over 4 reactions in the full pathway
- PWY-5041, S-adenosyl-L-methionine cycle II: PWY-5041
- 4 reactions found over 4 reactions in the full pathway
Reconstruction information
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: