Difference between revisions of "Trans-D2-cis-D19-C38-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12184 RXN-12184] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF...")
 
(Created page with "Category:Gene == Gene Tiso_gene_17705 == * left end position: ** 1348 * transcription direction: ** POSITIVE * right end position: ** 3028 * centisome position: ** 38.3717...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12184 RXN-12184] ==
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== Gene Tiso_gene_17705 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1348
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* common name:
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* transcription direction:
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** polyketide_synthase
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** POSITIVE
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** ORF
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* right end position:
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** long_chain_acyl-_synthetase
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** 3028
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** acyl-_synthetase
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* centisome position:
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* ec number:
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** 38.37176   
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[HOMOSERKIN-RXN]]
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** 1 [[CPD-17637]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-17638]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 7-hydroxylaurate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 7-hydroxylauroyl-CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_500]]
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** [[pantograph]]-[[esiliculosus]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[creinhardtii]]
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***EC-NUMBER
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== Pathways associated ==
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* [[Tiso_gene_13394]]
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* [[PWY-702]]
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** IN-SILICO_ANNOTATION
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* [[HOMOSER-THRESYN-PWY]]
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***EC-NUMBER
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* [[Tiso_gene_9394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7855]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4191]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_348]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
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** '''8''' reactions found over '''18''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=1348}}
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{{#set: common name=polyketide_synthase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=ORF}}
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{{#set: right end position=3028}}
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{{#set: common name=long_chain_acyl-_synthetase}}
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{{#set: centisome position=38.37176    }}
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{{#set: common name=acyl-_synthetase}}
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{{#set: reaction associated=HOMOSERKIN-RXN}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: pathway associated=PWY-702|HOMOSER-THRESYN-PWY}}
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{{#set: gene associated=Tiso_gene_500|Tiso_gene_13394|Tiso_gene_9394|Tiso_gene_7855|Tiso_gene_136|Tiso_gene_4191|Tiso_gene_348|Tiso_gene_10876|Tiso_gene_135}}
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{{#set: in pathway=PWY-6733}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:44, 10 January 2018

Gene Tiso_gene_17705

  • left end position:
    • 1348
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3028
  • centisome position:
    • 38.37176
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Trans-D2-cis-D19-C38-ACPs&oldid=14429"