Difference between revisions of "ADENOSYLCOBALAMIN-5-P"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_1764 == * Synonym(s): == Reactions associated == * GLYNA1th ** pantograph-creinhardtii * GLYNA1tm ** pantograph-crei...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPREDUCT-RXN CDPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonucleoside-diph...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_1764 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPREDUCT-RXN CDPREDUCT-RXN] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 +
* common name:
 +
** ribonucleoside-diphosphate_reductase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[GLYNA1th]]
+
* With identifiers:
−
** [[pantograph]]-[[creinhardtii]]
+
** 1 [[CDP]][c] '''+''' 1 [[Red-Thioredoxin]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[DCDP]][c] '''+''' 1 [[Ox-Thioredoxin]][c]
−
* [[GLYNA1tm]]
+
* With common name(s):
−
** [[pantograph]]-[[creinhardtii]]
+
** 1 CDP[c] '''+''' 1 a reduced thioredoxin[c] '''=>''' 1 H2O[c] '''+''' 1 dCDP[c] '''+''' 1 an oxidized thioredoxin[c]
−
* [[RXN0-4083]]
+
 
−
** [[pantograph]]-[[creinhardtii]]
+
== Genes associated with this reaction  ==
−
** [[pantograph]]-[[creinhardtii]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[TRANS-RXN-118]]
+
* [[Tiso_gene_9915]]
−
** [[pantograph]]-[[creinhardtii]]
+
** EXPERIMENTAL_ANNOTATION
−
* [[TRANS-RXN-125]]
+
***EC-NUMBER
−
** [[pantograph]]-[[creinhardtii]]
+
* [[Tiso_gene_10138]]
−
** [[pantograph]]-[[creinhardtii]]
+
** [[pantograph]]-[[athaliana]]
−
== Pathways associated ==
+
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_9916]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_10617]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways  ==
 +
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
 +
** '''12''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[synechocystis]]
 +
*** [[athaliana]]
 +
*** [[esiliculosus]]
 +
* [[manual]]:
 +
** [[primary_network]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: reaction associated=GLYNA1th|GLYNA1tm|RXN0-4083|TRANS-RXN-118|TRANS-RXN-125}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28038 28038]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02024 R02024]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ribonucleoside-diphosphate_reductase}}
 +
{{#set: ec number=EC-1.17.4.1}}
 +
{{#set: gene associated=Tiso_gene_9915|Tiso_gene_10138|Tiso_gene_9916|Tiso_gene_10617}}
 +
{{#set: in pathway=PWY-7184|PWY-7198|PWY-6545|PWY0-166|PWY-7210}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=synechocystis|athaliana|esiliculosus}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:12, 10 January 2018

Reaction CDPREDUCT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ribonucleoside-diphosphate_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 CDP[c] + 1 a reduced thioredoxin[c] => 1 H2O[c] + 1 dCDP[c] + 1 an oxidized thioredoxin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7198, pyrimidine deoxyribonucleotides de novo biosynthesis IV: PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III: PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
    • 12 reactions found over 17 reactions in the full pathway
  • PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP: PWY-7210
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ADENOSYLCOBALAMIN-5-P&oldid=16680"