Difference between revisions of "Tiso gene 19108"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-ISOVALERYL-COA 3-HYDROXY-ISOVALERYL-COA] == * smiles: ** CC(COP(=O)([O-])OP(=O)([O-])...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-ISOVALERYL-COA 3-HYDROXY-ISOVALERYL-COA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN] ==
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* smiles:
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* direction:
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** CC(COP(=O)([O-])OP(=O)([O-])OCC3(C(C(C(N2(C=NC1(C(=NC=NC=12)N)))O3)O)OP([O-])([O-])=O))(C)C(C(NCCC(NCCSC(=O)CC(C)(C)O)=O)=O)O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=PEVZKILCBDEOBT-UHFFFAOYSA-J
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* common name:
 
* common name:
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** 3-hydroxyisovaleryl-CoA
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** probable_gamma_hydroxybutyrate_dehydrogenase
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* molecular weight:
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** gamma_hydroxybutyrate_dehydrogenase
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** 863.619   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.61 EC-1.1.1.61]
 
* Synonym(s):
 
* Synonym(s):
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** 3-hydroxy-isovaleryl-coa
 
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** 3-hydroxy-iso-valeryl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[SUCC-S-ALD]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[4-HYDROXY-BUTYRATE]][c] '''+''' 1 [[NAD]][c]
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* [[RXN-14266]]
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* With common name(s):
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** 1 succinate semialdehyde[c] '''+''' 1 H+[c] '''+''' 1 NADH[c] '''=>''' 1 4-hydroxybutanoate[c] '''+''' 1 NAD+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_777]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_91]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5677]], succinate fermentation to butanoate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5677 PWY-5677]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5022]], 4-aminobutanoate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5022 PWY-5022]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25203667 25203667]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23948 23948]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=62555 62555]
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** [http://www.genome.jp/dbget-bin/www_bget?R01644 R01644]
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{{#set: smiles=CC(COP(=O)([O-])OP(=O)([O-])OCC3(C(C(C(N2(C=NC1(C(=NC=NC=12)N)))O3)O)OP([O-])([O-])=O))(C)C(C(NCCC(NCCSC(=O)CC(C)(C)O)=O)=O)O}}
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* UNIPROT:
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{{#set: inchi key=InChIKey=PEVZKILCBDEOBT-UHFFFAOYSA-J}}
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** [http://www.uniprot.org/uniprot/Q59104 Q59104]
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{{#set: common name=3-hydroxyisovaleryl-CoA}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: molecular weight=863.619    }}
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{{#set: common name=probable_gamma_hydroxybutyrate_dehydrogenase}}
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{{#set: common name=3-hydroxy-isovaleryl-coa|3-hydroxy-iso-valeryl-CoA}}
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{{#set: common name=gamma_hydroxybutyrate_dehydrogenase}}
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{{#set: consumed or produced by=RXN-14266}}
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{{#set: ec number=EC-1.1.1.61}}
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{{#set: gene associated=Tiso_gene_777|Tiso_gene_91}}
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{{#set: in pathway=PWY-5677|PWY-5022}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:37, 10 January 2018

Reaction 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • probable_gamma_hydroxybutyrate_dehydrogenase
    • gamma_hydroxybutyrate_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 succinate semialdehyde[c] + 1 H+[c] + 1 NADH[c] => 1 4-hydroxybutanoate[c] + 1 NAD+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5677, succinate fermentation to butanoate: PWY-5677
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-5022, 4-aminobutanoate degradation V: PWY-5022
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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