Difference between revisions of "DNA-Holder"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydro...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=LIPASYN-PWY LIPASYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=LIPASYN-PWY LIPASYN-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
−
** dihydrodipicolinate_synthase
+
** phospholipases
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/4.3.3.7 EC-4.3.3.7]
+
 
* Synonym(s):
 
* Synonym(s):
−
** dihydropicolinate synthetase
+
** phospholipase pathway
−
** dihydrodipicolinic acid synthase
+
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
* '''2''' reaction(s) found
−
** 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[CPD-14443]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c]
+
** [[PHOSPHOLIPASE-A2-RXN]]
−
* With common name(s):
+
** [[3.1.4.11-RXN]]
−
** 1 L-aspartate-semialdehyde[c] '''+''' 1 pyruvate[c] '''=>''' 1 (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 H+[c] '''+''' 1 H2O[c]
+
== Reaction(s) not found ==
−
 
+
* '''3''' reaction(s) not found
−
== Genes associated with this reaction  ==
+
** [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOLIPASE-C-RXN PHOSPHOLIPASE-C-RXN]
−
Genes have been associated with this reaction based on different elements listed below.
+
** [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOLIPASE-A1-RXN PHOSPHOLIPASE-A1-RXN]
−
* [[Tiso_gene_14829]]
+
** [http://metacyc.org/META/NEW-IMAGE?object=PHOSCHOL-RXN PHOSCHOL-RXN]
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways  ==
+
−
* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
+
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
−
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* ARACYC:
−
** [http://www.genome.jp/dbget-bin/www_bget?R10147 R10147]
+
** [http://metacyc.org/ARA/NEW-IMAGE?object=LIPASYN-PWY LIPASYN-PWY]
−
** [http://www.genome.jp/dbget-bin/www_bget?R02292 R02292]
+
{{#set: taxonomic range=TAX-2759}}
−
* UNIPROT:
+
{{#set: taxonomic range=TAX-2}}
−
** [http://www.uniprot.org/uniprot/P43797 P43797]
+
{{#set: taxonomic range=TAX-2157}}
−
** [http://www.uniprot.org/uniprot/O26892 O26892]
+
{{#set: common name=phospholipases}}
−
** [http://www.uniprot.org/uniprot/Q9Z6K9 Q9Z6K9]
+
{{#set: common name=phospholipase pathway}}
−
** [http://www.uniprot.org/uniprot/Q9X1K9 Q9X1K9]
+
{{#set: reaction found=2}}
−
** [http://www.uniprot.org/uniprot/P19808 P19808]
+
{{#set: reaction not found=3}}
−
** [http://www.uniprot.org/uniprot/Q9ZM13 Q9ZM13]
+
−
** [http://www.uniprot.org/uniprot/O05969 O05969]
+
−
** [http://www.uniprot.org/uniprot/Q9CF61 Q9CF61]
+
−
** [http://www.uniprot.org/uniprot/Q04796 Q04796]
+
−
** [http://www.uniprot.org/uniprot/Q57695 Q57695]
+
−
** [http://www.uniprot.org/uniprot/O25657 O25657]
+
−
** [http://www.uniprot.org/uniprot/O67216 O67216]
+
−
** [http://www.uniprot.org/uniprot/O29352 O29352]
+
−
** [http://www.uniprot.org/uniprot/O84366 O84366]
+
−
** [http://www.uniprot.org/uniprot/Q9PPB4 Q9PPB4]
+
−
** [http://www.uniprot.org/uniprot/P63945 P63945]
+
−
** [http://www.uniprot.org/uniprot/Q9JUU9 Q9JUU9]
+
−
** [http://www.uniprot.org/uniprot/Q9LZX6 Q9LZX6]
+
−
** [http://www.uniprot.org/uniprot/Q43038 Q43038]
+
−
** [http://www.uniprot.org/uniprot/P49423 P49423]
+
−
** [http://www.uniprot.org/uniprot/Q55513 Q55513]
+
−
** [http://www.uniprot.org/uniprot/P0A6L2 P0A6L2]
+
−
** [http://www.uniprot.org/uniprot/Q42948 Q42948]
+
−
** [http://www.uniprot.org/uniprot/Q42940 Q42940]
+
−
** [http://www.uniprot.org/uniprot/O86841 O86841]
+
−
** [http://www.uniprot.org/uniprot/P24847 P24847]
+
−
** [http://www.uniprot.org/uniprot/P24846 P24846]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=dihydrodipicolinate_synthase}}
+
−
{{#set: ec number=EC-4.3.3.7}}
+
−
{{#set: common name=dihydropicolinate synthetase|dihydrodipicolinic acid synthase}}
+
−
{{#set: gene associated=Tiso_gene_14829}}
+
−
{{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 15:41, 10 January 2018

Pathway LIPASYN-PWY

Reaction(s) found

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DNA-Holder&oldid=10005"