Difference between revisions of "PWY-6689"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] == * direction: ** LEFT-...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1884 RXN-1884] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1884 RXN-1884] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** cryptochrome_photolyase_fad-binding_domain-containing_protein
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.99.3 EC-4.1.99.3]
+
** [http://enzyme.expasy.org/EC/1.1.1.316 EC-1.1.1.316]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DNA-With-Pyrimidine-Dimers]][c] '''=>''' 1 [[DNA-Adjacent-Pyrimidines]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[L-Galactopyranose]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-330]][c]
 
* With common name(s):
 
* With common name(s):
−
**
+
** 1 NAD+[c] '''+''' 1 L-galactopyranose[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 L-galactono-1,4-lactone[c]
 +
 
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_15524]]
+
* [[Tiso_gene_703]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_15525]]
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* [[Tiso_gene_14920]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_6548]]
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* [[Tiso_gene_4219]]
−
** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[athaliana]]
−
***EC-NUMBER
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* [[Tiso_gene_18748]]
−
* [[Tiso_gene_16321]]
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_15196]]
+
* [[Tiso_gene_14624]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_6547]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_6546]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 +
*** [[athaliana]]
 
*** [[esiliculosus]]
 
*** [[esiliculosus]]
−
* [[annotation]]:
 
−
** [[pathwaytools]]:
 
−
*** [[in-silico_annotation]]
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31562 31562]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00034 R00034]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07675 R07675]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P12769 P12769]
+
−
** [http://www.uniprot.org/uniprot/Q9JSP8 Q9JSP8]
+
−
** [http://www.uniprot.org/uniprot/Q9HQ46 Q9HQ46]
+
−
** [http://www.uniprot.org/uniprot/P12768 P12768]
+
−
** [http://www.uniprot.org/uniprot/P27526 P27526]
+
−
** [http://www.uniprot.org/uniprot/P25078 P25078]
+
−
** [http://www.uniprot.org/uniprot/Q43125 Q43125]
+
−
** [http://www.uniprot.org/uniprot/P40115 P40115]
+
−
** [http://www.uniprot.org/uniprot/Q28811 Q28811]
+
−
** [http://www.uniprot.org/uniprot/Q24443 Q24443]
+
−
** [http://www.uniprot.org/uniprot/Q91186 Q91186]
+
−
** [http://www.uniprot.org/uniprot/Q42696 Q42696]
+
−
** [http://www.uniprot.org/uniprot/P05066 P05066]
+
−
** [http://www.uniprot.org/uniprot/O24020 O24020]
+
−
** [http://www.uniprot.org/uniprot/O24374 O24374]
+
−
** [http://www.uniprot.org/uniprot/P00914 P00914]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=cryptochrome_photolyase_fad-binding_domain-containing_protein}}
+
{{#set: ec number=EC-1.1.1.316}}
−
{{#set: ec number=EC-4.1.99.3}}
+
{{#set: gene associated=Tiso_gene_703|Tiso_gene_14920|Tiso_gene_4219|Tiso_gene_18748|Tiso_gene_14624}}
−
{{#set: gene associated=Tiso_gene_15524|Tiso_gene_15525|Tiso_gene_6548|Tiso_gene_16321|Tiso_gene_15196|Tiso_gene_6547|Tiso_gene_6546}}
+
{{#set: in pathway=PWY-882}}
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=athaliana|esiliculosus}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 15:41, 10 January 2018

Reaction RXN-1884

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 L-galactopyranose[c] => 1 NADH[c] + 1 H+[c] + 1 L-galactono-1,4-lactone[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-882, L-ascorbate biosynthesis I (L-galactose pathway): PWY-882
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6689&oldid=10059"