Difference between revisions of "TRANS-RXN-137"

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(Created page with "Category:Gene == Gene Tiso_gene_3855 == * left end position: ** 1467 * transcription direction: ** POSITIVE * right end position: ** 4501 * centisome position: ** 9.21193...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13304 RXN-13304] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_3855 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13304 RXN-13304] ==
* left end position:
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* direction:
** 1467
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** LEFT-TO-RIGHT
* transcription direction:
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* ec number:
** POSITIVE
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** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
* right end position:
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** 4501
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* centisome position:
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** 9.21193   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[KETOACYLCOATHIOL-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[CPD-14277]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-14282]][c]
***ec-number
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* With common name(s):
** experimental_annotation
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** 1 (3R)-3-hydroxy-lignoceroyl-CoA[c] '''=>''' 1 H2O[c] '''+''' 1 trans-lignocer-2-enoyl-CoA[c]
***ec-number
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* [[RXN-10699]]
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== Genes associated with this reaction  ==
** in-silico_annotation
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== Pathways ==
***ec-number
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* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036]
** experimental_annotation
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** '''16''' reactions found over '''16''' reactions in the full pathway
***ec-number
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== Reconstruction information  ==
* [[RXN-10700]]
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* [[annotation]]:
** in-silico_annotation
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** [[pathwaytools]]:
***ec-number
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*** [[experimental_annotation]]
** experimental_annotation
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*** [[in-silico_annotation]]
***ec-number
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* [[RXN-10701]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-11246]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-12565]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-12710]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-13617]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14268]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14274]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14277]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14394]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14774]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14788]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14793]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14799]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14803]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-16137]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-17116]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-17778]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-17782]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-17787]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
+
***ec-number
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* [[RXN-17791]]
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** in-silico_annotation
+
***ec-number
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** experimental_annotation
+
***ec-number
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* [[RXN-17795]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
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* [[RXN-17799]]
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** in-silico_annotation
+
***ec-number
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** experimental_annotation
+
***ec-number
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== Pathways associated ==
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* [[PWY-6435]]
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* [[PWY-7654]]
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* [[PWY66-391]]
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* [[PWY-7606]]
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* [[PWY-7337]]
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* [[PWY-7340]]
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* [[PWY-7338]]
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* [[PWY-7094]]
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* [[PWY-6946]]
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* [[PWY-7288]]
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* [[PWY-735]]
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* [[PWY-5136]]
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* [[PWY-7726]]
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* [[PWY-6863]]
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* [[PWY-7339]]
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* [[PWY-6948]]
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* [[FAO-PWY]]
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* [[PWY-6945]]
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== External links  ==
 
== External links  ==
{{#set: left end position=1467}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-4.2.1.134}}
{{#set: right end position=4501}}
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{{#set: in pathway=PWY-7036}}
{{#set: centisome position=9.21193    }}
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{{#set: reconstruction category=annotation}}
{{#set: reaction associated=KETOACYLCOATHIOL-RXN|RXN-10699|RXN-10700|RXN-10701|RXN-11246|RXN-12565|RXN-12710|RXN-13617|RXN-14268|RXN-14274|RXN-14277|RXN-14394|RXN-14774|RXN-14788|RXN-14793|RXN-14799|RXN-14803|RXN-16137|RXN-17116|RXN-17778|RXN-17782|RXN-17787|RXN-17791|RXN-17795|RXN-17799}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: pathway associated=PWY-6435|PWY-7654|PWY66-391|PWY-7606|PWY-7337|PWY-7340|PWY-7338|PWY-7094|PWY-6946|PWY-7288|PWY-735|PWY-5136|PWY-7726|PWY-6863|PWY-7339|PWY-6948|FAO-PWY|PWY-6945}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:11, 10 January 2018

Reaction RXN-13304

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (3R)-3-hydroxy-lignoceroyl-CoA[c] => 1 H2O[c] + 1 trans-lignocer-2-enoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7036, very long chain fatty acid biosynthesis II: PWY-7036
    • 16 reactions found over 16 reactions in the full pathway

Reconstruction information

External links