Difference between revisions of "P163-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8443 RXN-8443] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE 2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE] == * smiles: ** CC...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8443 RXN-8443] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE 2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CC1(CO)(OP(=O)([O-])OP(=O)([O-])OCC(O)1)
−
* ec number:
+
* inchi key:
−
** [http://enzyme.expasy.org/EC/2.7.1.173 EC-2.7.1.173]
+
** InChIKey=SFRQRNJMIIUYDI-UHNVWZDZSA-L
 +
* common name:
 +
** 2-C-methyl-D-erythritol-2,4-cyclodiphosphate
 +
* molecular weight:
 +
** 276.076   
 
* Synonym(s):
 
* Synonym(s):
 +
** ME-2,4cPP
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[RXN0-882]]
−
** 1 [[CPD-8259]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[PROTON]][c]
+
* [[RXN-15878]]
−
* With common name(s):
+
== Reaction(s) known to produce the compound ==
−
** 1 β-D-ribosylnicotinate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 β-nicotinate D-ribonucleotide[c] '''+''' 1 H+[c]
+
* [[RXN0-302]]
−
 
+
== Reaction(s) of unknown directionality ==
−
== Genes associated with this reaction  ==
+
* [[HDS]]
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_12183]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_18221]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_12316]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_12252]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_12827]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_18943]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_4902]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_8561]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15010]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_14030]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_17047]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_8616]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_6111]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_19579]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_13724]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_4145]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_4144]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15483]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_17530]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_2752]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_9582]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_14059]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_19151]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_12450]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_1894]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_16455]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_13509]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_2262]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_12828]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_19763]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_17980]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_19611]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_8480]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_1696]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_17305]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[Tiso_gene_17795]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
== Pathways  ==
+
−
* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
+
−
** '''3''' reactions found over '''11''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
*** [[athaliana]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* PUBCHEM:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25568 25568]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=21605869 21605869]
−
* LIGAND-RXN:
+
* CHEMSPIDER:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03347 R03347]
+
** [http://www.chemspider.com/Chemical-Structure.10241147.html 10241147]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* CHEBI:
−
{{#set: ec number=EC-2.7.1.173}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58483 58483]
−
{{#set: gene associated=Tiso_gene_12183|Tiso_gene_18221|Tiso_gene_12316|Tiso_gene_12252|Tiso_gene_12827|Tiso_gene_18943|Tiso_gene_4902|Tiso_gene_8561|Tiso_gene_15010|Tiso_gene_14030|Tiso_gene_17047|Tiso_gene_8616|Tiso_gene_6111|Tiso_gene_19579|Tiso_gene_13724|Tiso_gene_4145|Tiso_gene_4144|Tiso_gene_15483|Tiso_gene_17530|Tiso_gene_2752|Tiso_gene_9582|Tiso_gene_14059|Tiso_gene_19151|Tiso_gene_12450|Tiso_gene_1894|Tiso_gene_16455|Tiso_gene_13509|Tiso_gene_2262|Tiso_gene_12828|Tiso_gene_19763|Tiso_gene_17980|Tiso_gene_19611|Tiso_gene_8480|Tiso_gene_1696|Tiso_gene_17305|Tiso_gene_17795}}
+
* BIGG : 2mecdp
−
{{#set: in pathway=PWY-5381}}
+
* LIGAND-CPD:
−
{{#set: reconstruction category=orthology}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C11453 C11453]
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: smiles=CC1(CO)(OP(=O)([O-])OP(=O)([O-])OCC(O)1)}}
−
{{#set: reconstruction source=esiliculosus|athaliana}}
+
{{#set: inchi key=InChIKey=SFRQRNJMIIUYDI-UHNVWZDZSA-L}}
 +
{{#set: common name=2-C-methyl-D-erythritol-2,4-cyclodiphosphate}}
 +
{{#set: molecular weight=276.076    }}
 +
{{#set: common name=ME-2,4cPP}}
 +
{{#set: consumed by=RXN0-882|RXN-15878}}
 +
{{#set: produced by=RXN0-302}}
 +
{{#set: consumed or produced by=HDS}}

Revision as of 16:31, 10 January 2018

Metabolite 2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE

  • smiles:
    • CC1(CO)(OP(=O)([O-])OP(=O)([O-])OCC(O)1)
  • inchi key:
    • InChIKey=SFRQRNJMIIUYDI-UHNVWZDZSA-L
  • common name:
    • 2-C-methyl-D-erythritol-2,4-cyclodiphosphate
  • molecular weight:
    • 276.076
  • Synonym(s):
    • ME-2,4cPP

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC1(CO)(OP(=O)([O-])OP(=O)([O-])OCC(O)1)" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=P163-PWY&oldid=13374"