Difference between revisions of "ALLANTOINASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_13636 == * left end position: ** 173 * transcription direction: ** POSITIVE * right end position: ** 2095 * centisome position: ** 2.802073...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNKIN-RXN PNKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxal_kinase * ec numbe...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_13636 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNKIN-RXN PNKIN-RXN] ==
* left end position:
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* direction:
** 173
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** LEFT-TO-RIGHT
* transcription direction:
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* common name:
** POSITIVE
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** pyridoxal_kinase
* right end position:
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* ec number:
** 2095
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** [http://enzyme.expasy.org/EC/2.7.1.35 EC-2.7.1.35]
* centisome position:
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** 2.8020732   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[ATP]][c] '''+''' 1 [[PYRIDOXINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXINE-5P]][c]
***ec-number
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* With common name(s):
** experimental_annotation
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** 1 ATP[c] '''+''' 1 pyridoxine[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 pyridoxine 5'-phosphate[c]
***ec-number
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== Pathways associated ==
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== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_6106]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways ==
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* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[creinhardtii]]
 +
*** [[esiliculosus]]
 +
*** [[athaliana]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=173}}
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* RHEA:
{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25108 25108]
{{#set: right end position=2095}}
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* LIGAND-RXN:
{{#set: centisome position=2.8020732    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01909 R01909]
{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyridoxal_kinase}}
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{{#set: ec number=EC-2.7.1.35}}
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{{#set: gene associated=Tiso_gene_6106}}
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{{#set: in pathway=PWY-7204|PWY-7282|PLPSAL-PWY}}
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{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:32, 10 January 2018

Reaction PNKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyridoxal_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 pyridoxine[c] => 1 ADP[c] + 1 H+[c] + 1 pyridoxine 5'-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7204, pyridoxal 5'-phosphate salvage II (plants): PWY-7204
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): PWY-7282
    • 6 reactions found over 9 reactions in the full pathway
  • PLPSAL-PWY, pyridoxal 5'-phosphate salvage I: PLPSAL-PWY
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links