Difference between revisions of "RXN-13430"

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(Created page with "Category:Gene == Gene Tiso_gene_13113 == * left end position: ** 1488 * transcription direction: ** POSITIVE * right end position: ** 4067 * centisome position: ** 22.8185...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7828 RXN-7828] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_13113 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7828 RXN-7828] ==
* left end position:
+
* direction:
** 1488
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** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** POSITIVE
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** [http://enzyme.expasy.org/EC/2.4.1 EC-2.4.1]
* right end position:
+
** 4067
+
* centisome position:
+
** 22.818586   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[CPD-12575]][c] '''+''' 1 [[PELARGONIDIN-3-GLUCOSIDE-CMPD]][c] '''=>''' 1 [[CPD-7137]][c] '''+''' 1 [[UDP]][c]
***ec-number
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* With common name(s):
== Pathways associated ==
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** 1 UDP-α-D-glucose[c] '''+''' 1 pelargonidin-3-O-β-D-glucoside[c] '''=>''' 1 pelargonidin-3,5-di-O-β-D-glucoside[c] '''+''' 1 UDP[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_3452]]
 +
** [[pantograph]]-[[athaliana]]
 +
== Pathways ==
 +
* [[PWY-5268]], salvianin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5268 PWY-5268]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5139]], pelargonidin conjugates biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5139 PWY-5139]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[athaliana]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=1488}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-2.4.1}}
{{#set: right end position=4067}}
+
{{#set: gene associated=Tiso_gene_3452}}
{{#set: centisome position=22.818586    }}
+
{{#set: in pathway=PWY-5268|PWY-5139}}
{{#set: reaction associated=PROTEIN-TYROSINE-PHOSPHATASE-RXN}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=athaliana}}

Revision as of 16:48, 10 January 2018

Reaction RXN-7828

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5268, salvianin biosynthesis: PWY-5268
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5139, pelargonidin conjugates biosynthesis: PWY-5139
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links