Difference between revisions of "L-methionyl-L-alanyl-Protein"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.39-RXN 3.2.1.39-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PORPHOBILSYNTH-RXN PORPHOBILSYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** delta-ami...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.39-RXN 3.2.1.39-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PORPHOBILSYNTH-RXN PORPHOBILSYNTH-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** delta-aminolevulinic_acid_dehydratase_chloroplastic
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.39 EC-3.2.1.39]
+
** [http://enzyme.expasy.org/EC/4.2.1.24 EC-4.2.1.24]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[1-3-beta-D-Glucans]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[1-3-beta-D-Glucans]][c]
+
** 2 [[5-AMINO-LEVULINATE]][c] '''=>''' 1 [[PORPHOBILINOGEN]][c] '''+''' 1 [[PROTON]][c] '''+''' 2 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 1,3-β-D-glucan[c] '''+''' 1 H2O[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 a 1,3-β-D-glucan[c]
+
** 2 5-aminolevulinate[c] '''=>''' 1 porphobilinogen[c] '''+''' 1 H+[c] '''+''' 2 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2599]]
+
* [[Tiso_gene_13382]]
−
** [[pantograph]]-[[esiliculosus]]
+
** IN-SILICO_ANNOTATION
−
* [[Tiso_gene_8689]]
+
***EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
** EXPERIMENTAL_ANNOTATION
−
* [[Tiso_gene_16519]]
+
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 +
*** [[creinhardtii]]
 +
*** [[synechocystis]]
 
*** [[esiliculosus]]
 
*** [[esiliculosus]]
 +
*** [[athaliana]]
 +
* [[manual]]:
 +
** [[primary_network]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24064 24064]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00036 R00036]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q7M1Y3 Q7M1Y3]
+
** [http://www.uniprot.org/uniprot/P06214 P06214]
−
** [http://www.uniprot.org/uniprot/P23546 P23546]
+
** [http://www.uniprot.org/uniprot/P13716 P13716]
−
** [http://www.uniprot.org/uniprot/Q7M1Y2 Q7M1Y2]
+
** [http://www.uniprot.org/uniprot/Q7M315 Q7M315]
−
** [http://www.uniprot.org/uniprot/P23547 P23547]
+
** [http://www.uniprot.org/uniprot/P30124 P30124]
−
** [http://www.uniprot.org/uniprot/P27666 P27666]
+
** [http://www.uniprot.org/uniprot/Q9JV37 Q9JV37]
−
** [http://www.uniprot.org/uniprot/Q7M1Y5 Q7M1Y5]
+
** [http://www.uniprot.org/uniprot/P30950 P30950]
−
** [http://www.uniprot.org/uniprot/Q7M1Y4 Q7M1Y4]
+
** [http://www.uniprot.org/uniprot/Q60178 Q60178]
−
** [http://www.uniprot.org/uniprot/P34742 P34742]
+
** [http://www.uniprot.org/uniprot/Q9PNU5 Q9PNU5]
−
** [http://www.uniprot.org/uniprot/Q02437 Q02437]
+
** [http://www.uniprot.org/uniprot/Q59295 Q59295]
−
** [http://www.uniprot.org/uniprot/Q45095 Q45095]
+
** [http://www.uniprot.org/uniprot/Q02250 Q02250]
−
** [http://www.uniprot.org/uniprot/P33157 P33157]
+
** [http://www.uniprot.org/uniprot/P10518 P10518]
−
** [http://www.uniprot.org/uniprot/Q41181 Q41181]
+
** [http://www.uniprot.org/uniprot/Q43148 Q43148]
−
** [http://www.uniprot.org/uniprot/P15737 P15737]
+
** [http://www.uniprot.org/uniprot/Q42682 Q42682]
−
** [http://www.uniprot.org/uniprot/P23432 P23432]
+
** [http://www.uniprot.org/uniprot/Q43058 Q43058]
−
** [http://www.uniprot.org/uniprot/P23433 P23433]
+
** [http://www.uniprot.org/uniprot/Q59643 Q59643]
−
** [http://www.uniprot.org/uniprot/P36401 P36401]
+
** [http://www.uniprot.org/uniprot/Q9S8B1 Q9S8B1]
−
** [http://www.uniprot.org/uniprot/Q40753 Q40753]
+
** [http://www.uniprot.org/uniprot/P05373 P05373]
−
** [http://www.uniprot.org/uniprot/Q7M1V4 Q7M1V4]
+
** [http://www.uniprot.org/uniprot/P0ACB2 P0ACB2]
−
** [http://www.uniprot.org/uniprot/Q02126 Q02126]
+
** [http://www.uniprot.org/uniprot/Q42836 Q42836]
−
** [http://www.uniprot.org/uniprot/Q06773 Q06773]
+
** [http://www.uniprot.org/uniprot/P43210 P43210]
−
** [http://www.uniprot.org/uniprot/P52401 P52401]
+
** [http://www.uniprot.org/uniprot/Q9ZNC9 Q9ZNC9]
−
** [http://www.uniprot.org/uniprot/Q02438 Q02438]
+
−
** [http://www.uniprot.org/uniprot/Q42944 Q42944]
+
−
** [http://www.uniprot.org/uniprot/P52400 P52400]
+
−
** [http://www.uniprot.org/uniprot/P52402 P52402]
+
−
** [http://www.uniprot.org/uniprot/Q9R650 Q9R650]
+
−
** [http://www.uniprot.org/uniprot/P52398 P52398]
+
−
** [http://www.uniprot.org/uniprot/P52399 P52399]
+
−
** [http://www.uniprot.org/uniprot/O50007 O50007]
+
−
** [http://www.uniprot.org/uniprot/Q43851 Q43851]
+
−
** [http://www.uniprot.org/uniprot/Q03467 Q03467]
+
−
** [http://www.uniprot.org/uniprot/Q03773 Q03773]
+
−
** [http://www.uniprot.org/uniprot/O82063 O82063]
+
−
** [http://www.uniprot.org/uniprot/O23783 O23783]
+
−
** [http://www.uniprot.org/uniprot/Q9M2M3 Q9M2M3]
+
−
** [http://www.uniprot.org/uniprot/Q9M4A9 Q9M4A9]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.2.1.39}}
+
{{#set: common name=delta-aminolevulinic_acid_dehydratase_chloroplastic}}
−
{{#set: gene associated=Tiso_gene_2599|Tiso_gene_8689|Tiso_gene_16519}}
+
{{#set: ec number=EC-4.2.1.24}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=Tiso_gene_13382}}
 +
{{#set: in pathway=PWY-5189|PWY-5188}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:07, 10 January 2018

Reaction PORPHOBILSYNTH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • delta-aminolevulinic_acid_dehydratase_chloroplastic
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5189, tetrapyrrole biosynthesis II (from glycine): PWY-5189
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate): PWY-5188
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=L-methionyl-L-alanyl-Protein&oldid=16262"