Difference between revisions of "Tiso gene 5071"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=MANNITOL MANNITOL] == * smiles: ** C(C(C(C(C(CO)O)O)O)O)O * inchi key: ** InChIKey=FBPFZTCFMRRE...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--TRNA-LIGASE-RXN ALANINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=MANNITOL MANNITOL] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--TRNA-LIGASE-RXN ALANINE--TRNA-LIGASE-RXN] ==
−
* smiles:
+
* direction:
−
** C(C(C(C(C(CO)O)O)O)O)O
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=FBPFZTCFMRRESA-KVTDHHQDSA-N
+
 
* common name:
 
* common name:
−
** D-mannitol
+
** threonine_alanine_trna_ligase_subfamily_protein
−
* molecular weight:
+
** ORF
−
** 182.173   
+
** alanyl-trna_synthetase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/6.1.1.7 EC-6.1.1.7]
 
* Synonym(s):
 
* Synonym(s):
−
** D-mitobronitol
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[MANNITOL-1-PHOSPHATASE-RXN]]
+
** 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[ALA-tRNAs]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''=>''' 1 [[Charged-ALA-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
−
* [[1.1.1.255-RXN]]
+
** 1 H+[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAala[c] '''+''' 1 L-alanine[c] '''=>''' 1 an L-alanyl-[tRNAala][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 H+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_3249]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_18609]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_2298]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_18607]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_19573]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways  ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* CAS : 69-65-8
+
* RHEA:
−
* METABOLIGHTS : MTBLC16899
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12540 12540]
−
* DRUGBANK : DB00742
+
* LIGAND-RXN:
−
* PUBCHEM:
+
** [http://www.genome.jp/dbget-bin/www_bget?R03038 R03038]
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6251 6251]
+
* UNIPROT:
−
* HMDB : HMDB00765
+
** [http://www.uniprot.org/uniprot/P56452 P56452]
−
* LIGAND-CPD:
+
** [http://www.uniprot.org/uniprot/O27718 O27718]
−
** [http://www.genome.jp/dbget-bin/www_bget?C00392 C00392]
+
** [http://www.uniprot.org/uniprot/O34526 O34526]
−
* CHEMSPIDER:
+
** [http://www.uniprot.org/uniprot/P47534 P47534]
−
** [http://www.chemspider.com/Chemical-Structure.6015.html 6015]
+
** [http://www.uniprot.org/uniprot/O58035 O58035]
−
* CHEBI:
+
** [http://www.uniprot.org/uniprot/Q9PI05 Q9PI05]
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16899 16899]
+
** [http://www.uniprot.org/uniprot/Q9JTG4 Q9JTG4]
−
* BIGG : mnl
+
** [http://www.uniprot.org/uniprot/Q57984 Q57984]
−
{{#set: smiles=C(C(C(C(C(CO)O)O)O)O)O}}
+
** [http://www.uniprot.org/uniprot/O51238 O51238]
−
{{#set: inchi key=InChIKey=FBPFZTCFMRRESA-KVTDHHQDSA-N}}
+
** [http://www.uniprot.org/uniprot/Q9CEW0 Q9CEW0]
−
{{#set: common name=D-mannitol}}
+
** [http://www.uniprot.org/uniprot/O83980 O83980]
−
{{#set: molecular weight=182.173    }}
+
** [http://www.uniprot.org/uniprot/Q9X1B6 Q9X1B6]
−
{{#set: common name=D-mitobronitol}}
+
** [http://www.uniprot.org/uniprot/Q9ZJY5 Q9ZJY5]
−
{{#set: produced by=MANNITOL-1-PHOSPHATASE-RXN}}
+
** [http://www.uniprot.org/uniprot/O67323 O67323]
−
{{#set: consumed or produced by=1.1.1.255-RXN}}
+
** [http://www.uniprot.org/uniprot/Q9ZCA4 Q9ZCA4]
 +
** [http://www.uniprot.org/uniprot/Q9Z714 Q9Z714]
 +
** [http://www.uniprot.org/uniprot/P49588 P49588]
 +
** [http://www.uniprot.org/uniprot/P43815 P43815]
 +
** [http://www.uniprot.org/uniprot/P50475 P50475]
 +
** [http://www.uniprot.org/uniprot/P24075 P24075]
 +
** [http://www.uniprot.org/uniprot/P27866 P27866]
 +
** [http://www.uniprot.org/uniprot/P35029 P35029]
 +
** [http://www.uniprot.org/uniprot/P40825 P40825]
 +
** [http://www.uniprot.org/uniprot/P75368 P75368]
 +
** [http://www.uniprot.org/uniprot/Q48976 Q48976]
 +
** [http://www.uniprot.org/uniprot/P00957 P00957]
 +
** [http://www.uniprot.org/uniprot/P21894 P21894]
 +
** [http://www.uniprot.org/uniprot/O50189 O50189]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=threonine_alanine_trna_ligase_subfamily_protein}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=alanyl-trna_synthetase}}
 +
{{#set: ec number=EC-6.1.1.7}}
 +
{{#set: gene associated=Tiso_gene_3249|Tiso_gene_18609|Tiso_gene_2298|Tiso_gene_18607|Tiso_gene_19573}}
 +
{{#set: in pathway=TRNA-CHARGING-PWY}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:08, 10 January 2018

Reaction ALANINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • threonine_alanine_trna_ligase_subfamily_protein
    • ORF
    • alanyl-trna_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5071&oldid=16305"