Difference between revisions of "RXN490-3641"

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(Created page with "Category:Gene == Gene Tiso_gene_3215 == * left end position: ** 1798 * transcription direction: ** NEGATIVE * right end position: ** 5707 * centisome position: ** 10.43710...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16137 RXN-16137] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_3215 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16137 RXN-16137] ==
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* left end position:
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* direction:
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** 1798
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** thiolase
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* right end position:
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** acetyl-_c-acetyltransferase
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** 5707
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** 3-ketoacyl-_thiolase
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* centisome position:
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* ec number:
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** 10.437105   
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-12086]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CPD-17388]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-17312]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 3-oxo-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 docosahexaenoyl-CoA[c]
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
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* [[RXN-12579]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* [[Tiso_gene_3855]]
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***ec-number
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** IN-SILICO_ANNOTATION
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** experimental_annotation
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***EC-NUMBER
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***ec-number
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** EXPERIMENTAL_ANNOTATION
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** [[pantograph]]-[[esiliculosus]]
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***EC-NUMBER
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* [[TRIACYLGLYCEROL-LIPASE-RXN]]
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* [[Tiso_gene_17451]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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** experimental_annotation
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** EXPERIMENTAL_ANNOTATION
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***ec-number
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15327]]
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== Pathways associated ==
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** EXPERIMENTAL_ANNOTATION
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* [[LIPAS-PWY]]
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***EC-NUMBER
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* [[PWY-6857]]
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* [[Tiso_gene_10116]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3856]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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** '''14''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=1798}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=thiolase}}
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{{#set: right end position=5707}}
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{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: centisome position=10.437105    }}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
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{{#set: gene associated=Tiso_gene_3855|Tiso_gene_17451|Tiso_gene_15327|Tiso_gene_10116|Tiso_gene_3856}}
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{{#set: in pathway=PWY-7606}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:10, 10 January 2018

Reaction RXN-16137

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thiolase
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] + 1 coenzyme A[c] => 1 acetyl-CoA[c] + 1 docosahexaenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN490-3641&oldid=16510"