Difference between revisions of "Tiso gene 1280"

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(Created page with "Category:Gene == Gene Tiso_gene_8720 == * left end position: ** 62 * transcription direction: ** POSITIVE * right end position: ** 2159 * centisome position: ** 0.6227401...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7253 RXN-7253] == * direction: ** LEFT-TO-RIGHT * common name: ** myo-inositol-1(or_4)-monophos...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_8720 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7253 RXN-7253] ==
* left end position:
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* direction:
** 62
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** LEFT-TO-RIGHT
* transcription direction:
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* common name:
** POSITIVE
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** myo-inositol-1(or_4)-monophosphatase
* right end position:
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* ec number:
** 2159
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** [http://enzyme.expasy.org/EC/3.1.3.25 EC-3.1.3.25]
* centisome position:
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** 0.6227401   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[2PGADEHYDRAT-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[WATER]][c] '''+''' 1 [[CPD-6746]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[MYO-INOSITOL]][c]
***ec-number
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* With common name(s):
** experimental_annotation
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** 1 H2O[c] '''+''' 1 1D-myo-inositol 2-monophosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 myo-inositol[c]
***ec-number
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** [[pantograph]]-[[athaliana]]
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== Genes associated with this reaction  ==
** [[pantograph]]-[[athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_2527]]
** [[pantograph]]-[[esiliculosus]]
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** IN-SILICO_ANNOTATION
** [[pantograph]]-[[creinhardtii]]
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***AUTOMATED-NAME-MATCH
** [[pantograph]]-[[creinhardtii]]
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** EXPERIMENTAL_ANNOTATION
** [[pantograph]]-[[creinhardtii]]
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***AUTOMATED-NAME-MATCH
* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
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== Pathways  ==
** [[pantograph]]-[[athaliana]]
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* [[PWY-4702]], phytate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4702 PWY-4702]
** [[pantograph]]-[[esiliculosus]]
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** '''2''' reactions found over '''14''' reactions in the full pathway
== Pathways associated ==
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== Reconstruction information  ==
* [[GLYCOLYSIS]]
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* [[annotation]]:
* [[PWY-6901]]
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** [[pathwaytools]]:
* [[P124-PWY]]
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*** [[experimental_annotation]]
* [[PWY-6886]]
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*** [[in-silico_annotation]]
* [[P341-PWY]]
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* [[PWY-1622]]
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* [[GLUCONEO-PWY]]
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* [[PWY-6707]]
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* [[PWY-1042]]
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* [[NPGLUCAT-PWY]]
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* [[PWY-5723]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-5484]]
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* [[PWY-7124]]
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* [[PWY-6142]]
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* [[PWY-7003]]
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* [[PWY-2221]]
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* [[PWY-6416]]
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* [[PWY-6163]]
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* [[PWY-7218]]
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* [[QUINATEDEG-PWY]]
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* [[P122-PWY]]
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* [[PWY66-399]]
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== External links  ==
 
== External links  ==
{{#set: left end position=62}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
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{{#set: common name=myo-inositol-1(or_4)-monophosphatase}}
{{#set: right end position=2159}}
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{{#set: ec number=EC-3.1.3.25}}
{{#set: centisome position=0.6227401    }}
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{{#set: gene associated=Tiso_gene_2527}}
{{#set: reaction associated=2PGADEHYDRAT-RXN|3-DEHYDROQUINATE-DEHYDRATASE-RXN}}
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{{#set: in pathway=PWY-4702}}
{{#set: pathway associated=GLYCOLYSIS|PWY-6901|P124-PWY|PWY-6886|P341-PWY|PWY-1622|GLUCONEO-PWY|PWY-6707|PWY-1042|NPGLUCAT-PWY|PWY-5723|ANAGLYCOLYSIS-PWY|PWY-5484|PWY-7124|PWY-6142|PWY-7003|PWY-2221|PWY-6416|PWY-6163|PWY-7218|QUINATEDEG-PWY|P122-PWY|PWY66-399}}
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{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:14, 10 January 2018

Reaction RXN-7253

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • myo-inositol-1(or_4)-monophosphatase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 1D-myo-inositol 2-monophosphate[c] => 1 phosphate[c] + 1 myo-inositol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_2527
    • IN-SILICO_ANNOTATION
      • AUTOMATED-NAME-MATCH
    • EXPERIMENTAL_ANNOTATION
      • AUTOMATED-NAME-MATCH

Pathways

  • PWY-4702, phytate degradation I: PWY-4702
    • 2 reactions found over 14 reactions in the full pathway

Reconstruction information

External links