Difference between revisions of "Tiso gene 2160"

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(Created page with "Category:Gene == Gene Tiso_gene_674 == * left end position: ** 11680 * transcription direction: ** NEGATIVE * right end position: ** 30124 * centisome position: ** 38.7088...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14793 RXN-14793] == * direction: ** LEFT-TO-RIGHT * common name: ** acetyl-_c-acetyltransferase...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_674 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14793 RXN-14793] ==
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* left end position:
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* direction:
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** 11680
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** acetyl-_c-acetyltransferase
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* right end position:
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** 3-ketoacyl-_thiolase
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** 30124
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** thiolase
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* centisome position:
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* ec number:
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** 38.70882   
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ATPASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-15678]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-15663]][c]
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***ec-number
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* With common name(s):
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** 1 coenzyme A[c] '''+''' 1 4-trans-3-oxo-undecenoyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 2-trans-nonenoyl-CoA[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[RXN-12195]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* [[Tiso_gene_3855]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[RXN-12196]]
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***EC-NUMBER
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** in-silico_annotation
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** EXPERIMENTAL_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN0-5462]]
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* [[Tiso_gene_10116]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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== Pathways associated ==
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** EXPERIMENTAL_ANNOTATION
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* [[PWY-7210]]
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***EC-NUMBER
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* [[PWY-7198]]
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* [[Tiso_gene_3856]]
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* [[PWY-6545]]
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** IN-SILICO_ANNOTATION
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* [[PWY-7184]]
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***EC-NUMBER
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* [[Tiso_gene_15327]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17451]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-7339]], 10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7339 PWY-7339]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=11680}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: right end position=30124}}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: centisome position=38.70882    }}
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{{#set: common name=thiolase}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-6545|PWY-7184}}
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{{#set: gene associated=Tiso_gene_3855|Tiso_gene_10116|Tiso_gene_3856|Tiso_gene_15327|Tiso_gene_17451}}
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{{#set: in pathway=PWY-7339}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:36, 10 January 2018

Reaction RXN-14793

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
    • thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 4-trans-3-oxo-undecenoyl-CoA[c] => 1 acetyl-CoA[c] + 1 2-trans-nonenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7339, 10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast): PWY-7339
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2160&oldid=18619"