Difference between revisions of "RPDPK"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_15599 == * left end position: ** 3461 * transcription direction: ** NEGATIVE * right end position: ** 4735 * centisome position: ** 70.1601...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12878 RXN-12878] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin-dependent_glutam...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12878 RXN-12878] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** ferredoxin-dependent_glutamate_synthase |
| − | * | + | |
| − | ** | + | |
| − | + | ||
| − | + | ||
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** [[pantograph]]-[[ | + | ** 1 [[GLT]][c] '''+''' 1 [[WATER]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 2 [[Reduced-ferredoxins]][c] |
| − | * [[ | + | * With common name(s): |
| − | ** | + | ** 1 L-glutamate[c] '''+''' 1 H2O[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''=>''' 2 H+[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 ammonium[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] |
| − | *** | + | |
| − | == Pathways | + | == Genes associated with this reaction == |
| − | * [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| − | * [[ | + | * [[Tiso_gene_2581]] |
| + | ** [[pantograph]]-[[esiliculosus]] | ||
| + | * [[Tiso_gene_1773]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***AUTOMATED-NAME-MATCH | ||
| + | * [[Tiso_gene_1154]] | ||
| + | ** EXPERIMENTAL_ANNOTATION | ||
| + | ***AUTOMATED-NAME-MATCH | ||
| + | ** [[pantograph]]-[[esiliculosus]] | ||
| + | == Pathways == | ||
| + | == Reconstruction information == | ||
| + | * [[orthology]]: | ||
| + | ** [[pantograph]]: | ||
| + | *** [[esiliculosus]] | ||
| + | * [[annotation]]: | ||
| + | ** [[pathwaytools]]: | ||
| + | *** [[experimental_annotation]] | ||
| + | *** [[in-silico_annotation]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R10086 R10086] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=ferredoxin-dependent_glutamate_synthase}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_2581|Tiso_gene_1773|Tiso_gene_1154}} |
| − | {{#set: | + | {{#set: in pathway=}} |
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
| + | {{#set: reconstruction source=esiliculosus}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
| + | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}} | ||
Revision as of 17:37, 10 January 2018
Contents
Reaction RXN-12878
- direction:
- LEFT-TO-RIGHT
- common name:
- ferredoxin-dependent_glutamate_synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 GLT[c] + 1 WATER[c] + 2 Oxidized-ferredoxins[c] => 2 PROTON[c] + 1 2-KETOGLUTARATE[c] + 1 AMMONIUM[c] + 2 Reduced-ferredoxins[c]
- With common name(s):
- 1 L-glutamate[c] + 1 H2O[c] + 2 an oxidized ferredoxin [iron-sulfur] cluster[c] => 2 H+[c] + 1 2-oxoglutarate[c] + 1 ammonium[c] + 2 a reduced ferredoxin [iron-sulfur] cluster[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_2581
- Tiso_gene_1773
- IN-SILICO_ANNOTATION
- AUTOMATED-NAME-MATCH
- IN-SILICO_ANNOTATION
- Tiso_gene_1154
- EXPERIMENTAL_ANNOTATION
- AUTOMATED-NAME-MATCH
- pantograph-esiliculosus
- EXPERIMENTAL_ANNOTATION
Pathways
Reconstruction information
External links
- LIGAND-RXN:
