Difference between revisions of "Tiso gene 11705"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7674 RXN-7674] == * direction: ** LEFT-TO-RIGHT * common name: ** chlorophyll_chloroplastic * e...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17428 RXN-17428] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl_diphosphate_...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7674 RXN-7674] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17428 RXN-17428] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** chlorophyll_chloroplastic
+
** geranylgeranyl_diphosphate_reductase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.62 EC-2.5.1.62]
+
** [http://enzyme.expasy.org/EC/1.3.1.83 EC-1.3.1.83]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-7014]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''=>''' 1 [[CHLOROPHYLL-B]][c] '''+''' 1 [[PPI]][c]
+
** 3 [[PROTON]][c] '''+''' 3 [[NADPH]][c] '''+''' 1 [[CPD-7005]][c] '''=>''' 1 [[CHLOROPHYLL-A]][c] '''+''' 3 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 chlorophyllide b[c] '''+''' 2 H+[c] '''+''' 1 phytyl diphosphate[c] '''=>''' 1 chlorophyll b[c] '''+''' 1 diphosphate[c]
+
** 3 H+[c] '''+''' 3 NADPH[c] '''+''' 1 geranylgeranyl chlorophyll a[c] '''=>''' 1 chlorophyll a[c] '''+''' 3 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_19542]]
+
* [[Tiso_gene_2613]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 
** [[pantograph]]-[[creinhardtii]]
 
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
Line 30: Line 30:
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R09067 R09067]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=chlorophyll_chloroplastic}}
+
{{#set: common name=geranylgeranyl_diphosphate_reductase}}
−
{{#set: ec number=EC-2.5.1.62}}
+
{{#set: ec number=EC-1.3.1.83}}
−
{{#set: gene associated=Tiso_gene_19542}}
+
{{#set: gene associated=Tiso_gene_2613}}
−
{{#set: in pathway=PWY-5068}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
Line 44: Line 43:
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:37, 10 January 2018

Reaction RXN-17428

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • geranylgeranyl_diphosphate_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 3 H+[c] + 3 NADPH[c] + 1 geranylgeranyl chlorophyll a[c] => 1 chlorophyll a[c] + 3 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11705&oldid=18714"