Difference between revisions of "TOLUENE-DEG-CATECHOL-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.27-RXN 1.2.1.27-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** methylmalonate-semial...")
(Created page with "Category:Gene == Gene Tiso_gene_1306 == * left end position: ** 10645 * transcription direction: ** POSITIVE * right end position: ** 11869 * centisome position: ** 37.329...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.27-RXN 1.2.1.27-RXN] ==
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== Gene Tiso_gene_1306 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 10645
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* common name:
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* transcription direction:
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** methylmalonate-semialdehyde_dehydrogenase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.2.1.27 EC-1.2.1.27]
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** 11869
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* centisome position:
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** 37.32992   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ATPASE-RXN]]
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** 1 [[CPD-12179]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[HCO3]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 methylmalonate semialdehyde[c] '''+''' 1 coenzyme A[c] '''+''' 1 H2O[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 propanoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 hydrogencarbonate[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_11323]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-5642]], 2,4-dinitrotoluene degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5642 PWY-5642]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=10645}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20804 20804]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=11869}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00922 R00922]
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{{#set: centisome position=37.32992    }}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q02253 Q02253]
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** [http://www.uniprot.org/uniprot/Q07536 Q07536]
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** [http://www.uniprot.org/uniprot/P28810 P28810]
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** [http://www.uniprot.org/uniprot/O49218 O49218]
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** [http://www.uniprot.org/uniprot/Q7KW39 Q7KW39]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=methylmalonate-semialdehyde_dehydrogenase}}
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{{#set: ec number=EC-1.2.1.27}}
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{{#set: gene associated=Tiso_gene_11323}}
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{{#set: in pathway=PWY-5642}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:04, 18 March 2018

Gene Tiso_gene_1306

  • left end position:
    • 10645
  • transcription direction:
    • POSITIVE
  • right end position:
    • 11869
  • centisome position:
    • 37.32992
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TOLUENE-DEG-CATECHOL-PWY&oldid=21762"