Difference between revisions of "Cis-cis-D19-37-C56-2-ACPs"

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(Created page with "Category:Gene == Gene Tiso_gene_3080 == * left end position: ** 20 * transcription direction: ** POSITIVE * right end position: ** 7065 * centisome position: ** 0.10166734...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11244 RXN-11244] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_3080 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11244 RXN-11244] ==
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* left end position:
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* direction:
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** 20
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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* right end position:
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** 7065
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* centisome position:
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** 0.10166734   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-15556]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[WATER]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''=>''' 1 [[CPD-12199]][c]
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***ec-number
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* With common name(s):
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** 1 H2O[c] '''+''' 1 4-coumaroyl-CoA[c] '''=>''' 1 3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7511]]
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* [[Tiso_gene_16145]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14262]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6885]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6435]], 4-hydroxybenzoate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6435 PWY-6435]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7046]], 4-coumarate degradation (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7046 PWY-7046]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=20}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: right end position=7065}}
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{{#set: gene associated=Tiso_gene_16145|Tiso_gene_14262|Tiso_gene_6885}}
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{{#set: centisome position=0.10166734    }}
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{{#set: in pathway=PWY-6435|PWY-7046}}
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 18:11, 18 March 2018

Reaction RXN-11244

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 4-coumaroyl-CoA[c] => 1 3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6435, 4-hydroxybenzoate biosynthesis V: PWY-6435
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7046, 4-coumarate degradation (anaerobic): PWY-7046
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Cis-cis-D19-37-C56-2-ACPs&oldid=22488"