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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTERIDINEPYROPHOSPHOKIN-RXN H2PTERIDINEPYROPHOSPHOKIN-RXN] == | + | == Gene Tiso_gene_3970 == |
| − | * direction: | + | * left end position: |
| − | ** LEFT-TO-RIGHT | + | ** 6773 |
| − | * common name: | + | * transcription direction: |
| − | ** folic_acid_synthesis_protein | + | ** POSITIVE |
| − | * ec number: | + | * right end position: |
| − | ** [http://enzyme.expasy.org/EC/2.7.6.3 EC-2.7.6.3] | + | ** 8347 |
| | + | * centisome position: |
| | + | ** 43.07428 |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]] |
| − | ** 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[DIHYDROPTERIN-CH2OH-PP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c]
| + | ** in-silico_annotation |
| − | * With common name(s):
| + | ***ec-number |
| − | ** 1 6-(hydroxymethyl)-7,8-dihydropterin[c] '''+''' 1 ATP[c] '''=>''' 1 (7,8-dihydropterin-6-yl)methyl diphosphate[c] '''+''' 1 H+[c] '''+''' 1 AMP[c]
| + | == Pathways associated == |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_11659]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | == Pathways ==
| + | |
| − | * [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539] | + | |
| − | ** '''4''' reactions found over '''5''' reactions in the full pathway | + | |
| − | * [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797]
| + | |
| − | ** '''3''' reactions found over '''7''' reactions in the full pathway | + | |
| − | * [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147] | + | |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[athaliana]]
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: left end position=6773}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11412 11412]
| + | {{#set: transcription direction=POSITIVE}} |
| − | * LIGAND-RXN:
| + | {{#set: right end position=8347}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03503 R03503]
| + | {{#set: centisome position=43.07428 }} |
| − | * UNIPROT:
| + | {{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}} |
| − | ** [http://www.uniprot.org/uniprot/P22291 P22291]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P26281 P26281]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O84619 O84619]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZM35 Q9ZM35]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9RXY4 Q9RXY4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O66550 O66550]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O25680 O25680]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PJ54 Q9PJ54]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JV81 Q9JV81]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P64143 P64143]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9Z7E8 Q9Z7E8]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P82602 P82602]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P29252 P29252]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P72736 P72736]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O04862 O04862]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9SZV3 Q9SZV3]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9X8I1 Q9X8I1]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=folic_acid_synthesis_protein}} | + | |
| − | {{#set: ec number=EC-2.7.6.3}} | + | |
| − | {{#set: gene associated=Tiso_gene_11659}} | + | |
| − | {{#set: in pathway=PWY-7539|PWY-6797|PWY-6147}} | + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=athaliana|esiliculosus}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=in-silico_annotation}}
| + | |
