Difference between revisions of "RXN-16099"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-576 RXN66-576] == * direction: ** LEFT-TO-RIGHT * common name: ** dimethylglycine_dehydrogena...")
(Created page with "Category:Gene == Gene Tiso_gene_1667 == * left end position: ** 11858 * transcription direction: ** POSITIVE * right end position: ** 13301 * centisome position: ** 53.220...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-576 RXN66-576] ==
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== Gene Tiso_gene_1667 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 11858
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* common name:
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* transcription direction:
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** dimethylglycine_dehydrogenase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.5.8 EC-1.5.8]
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** 13301
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* centisome position:
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** 53.22023   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[R4-RXN]]
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** 1 [[DIMETHYL-GLYCINE]][c] '''+''' 1 [[THF-GLU-N]][c] '''+''' 2 [[ETF-Oxidized]][c] '''+''' 3 [[PROTON]][c] '''=>''' 2 [[ETF-Reduced]][c] '''+''' 1 [[SARCOSINE]][c] '''+''' 1 [[5-10-METHENYL-THF-GLU-N]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 dimethylglycine[c] '''+''' 1 a tetrahydrofolate[c] '''+''' 2 an oxidized electron-transfer flavoprotein[c] '''+''' 3 H+[c] '''=>''' 2 a reduced electron-transfer flavoprotein[c] '''+''' 1 sarcosine[c] '''+''' 1 a 5,10-methenyltetrahydrofolate[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_2717]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-3661-1]], glycine betaine degradation II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661-1 PWY-3661-1]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=11858}}
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{{#set: common name=dimethylglycine_dehydrogenase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.5.8}}
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{{#set: right end position=13301}}
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{{#set: gene associated=Tiso_gene_2717}}
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{{#set: centisome position=53.22023    }}
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{{#set: in pathway=PWY-3661-1}}
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{{#set: reaction associated=R4-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:26, 18 March 2018

Gene Tiso_gene_1667

  • left end position:
    • 11858
  • transcription direction:
    • POSITIVE
  • right end position:
    • 13301
  • centisome position:
    • 53.22023
  • Synonym(s):

Reactions associated

  • R4-RXN
    • in-silico_annotation
      • automated-name-match

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16099&oldid=24335"