Difference between revisions of "Tiso gene 13864"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.9.3-RXN 2.7.9.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** selenophosphate_synthet...")
(Created page with "Category:Gene == Gene Tiso_gene_6339 == * left end position: ** 10787 * transcription direction: ** POSITIVE * right end position: ** 11619 * centisome position: ** 87.606...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.9.3-RXN 2.7.9.3-RXN] ==
+
== Gene Tiso_gene_6339 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 10787
−
* common name:
+
* transcription direction:
−
** selenophosphate_synthetase
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.7.9.3 EC-2.7.9.3]
+
** 11619
 +
* centisome position:
 +
** 87.6066   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[ADENYLYLSULFATASE-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[SE-2]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[SEPO3]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[AMP]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 H2O[c] '''+''' 1 selenide[c] '''+''' 1 ATP[c] '''=>''' 1 selenophosphate[c] '''+''' 1 phosphate[c] '''+''' 1 AMP[c]
+
== Pathways associated ==
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_5669]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14608]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5668]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY0-901]], L-selenocysteine biosynthesis I (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-901 PWY0-901]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=10787}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18737 18737]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=11619}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03595 R03595]
+
{{#set: centisome position=87.6066    }}
−
* UNIPROT:
+
{{#set: reaction associated=ADENYLYLSULFATASE-RXN}}
−
** [http://www.uniprot.org/uniprot/Q9PMF9 Q9PMF9]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=selenophosphate_synthetase}}
+
−
{{#set: ec number=EC-2.7.9.3}}
+
−
{{#set: gene associated=Tiso_gene_5669|Tiso_gene_14608|Tiso_gene_5668}}
+
−
{{#set: in pathway=PWY0-901|PWY-6281}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 19:35, 18 March 2018

Gene Tiso_gene_6339

  • left end position:
    • 10787
  • transcription direction:
    • POSITIVE
  • right end position:
    • 11619
  • centisome position:
    • 87.6066
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13864&oldid=25457"