Difference between revisions of "NAPHTHOATE-SYN-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_6521 == * left end position: ** 10978 * transcription direction: ** POSITIVE * right end position: ** 11897 * centisome position: ** 90.674...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15131 RXN-15131] == * direction: ** LEFT-TO-RIGHT * common name: ** cystathionine beta-lyase *...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_6521 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15131 RXN-15131] ==
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* left end position:
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* direction:
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** 10978
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** cystathionine beta-lyase
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* right end position:
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** 11897
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* centisome position:
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** 90.67482   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN0-1081]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[L-CYSTATHIONINE]][c] '''=>''' 1 [[HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[2-AMINOACRYLATE]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 L-cystathionine[c] '''=>''' 1 L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 2-aminoprop-2-enoate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3732]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-801]], L-homocysteine and L-cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=10978}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=cystathionine beta-lyase}}
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{{#set: right end position=11897}}
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{{#set: gene associated=Tiso_gene_3732}}
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{{#set: centisome position=90.67482    }}
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{{#set: in pathway=HOMOSER-METSYN-PWY|PWY-801|PWY-702}}
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{{#set: reaction associated=RXN0-1081}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 18:41, 18 March 2018

Reaction RXN-15131

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cystathionine beta-lyase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I: HOMOSER-METSYN-PWY
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-801, L-homocysteine and L-cysteine interconversion: PWY-801
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-702, L-methionine biosynthesis II: PWY-702
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=NAPHTHOATE-SYN-RXN&oldid=26113"