Difference between revisions of "RXN-1121"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11840 RXN-11840] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_pseudouridinesynthase...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DTDP-RHAMNOSE DTDP-RHAMNOSE] == * smiles: ** CC1(=CN(C(=O)NC(=O)1)C3(CC(O)C(COP(=O)([O-])OP(=O)...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11840 RXN-11840] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DTDP-RHAMNOSE DTDP-RHAMNOSE] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** CC1(=CN(C(=O)NC(=O)1)C3(CC(O)C(COP(=O)([O-])OP(=O)([O-])OC2(OC(C)C(O)C(O)C(O)2))O3))
 +
* inchi key:
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** InChIKey=ZOSQFDVXNQFKBY-CGAXJHMRSA-L
 
* common name:
 
* common name:
** trna_pseudouridinesynthase
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** dTDP-β-L-rhamnose
** trna_pseudouridine_synthase
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* molecular weight:
* ec number:
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** 546.317   
** [http://enzyme.expasy.org/EC/5.4.99.26 EC-5.4.99.26]
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* Synonym(s):
 
* Synonym(s):
 +
** dTDP-6-deoxy-β-L-mannose
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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== Reaction(s) known to produce the compound ==
** 1 [[tRNA-uridine65]][c] '''=>''' 1 [[tRNA-pseudouridine65]][c]
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* [[DTDPDEHYRHAMREDUCT-RXN]]
* With common name(s):
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== Reaction(s) of unknown directionality ==
** 1 a uridine65 in tRNA[c] '''=>''' 1 a pseudouridine65 in tRNA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_4021]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_9833]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_18959]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4020]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_19622]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_2988]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_11913]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 572-96-3
{{#set: common name=trna_pseudouridinesynthase}}
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* PUBCHEM:
{{#set: common name=trna_pseudouridine_synthase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245982 25245982]
{{#set: ec number=EC-5.4.99.26}}
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* HMDB : HMDB06354
{{#set: gene associated=Tiso_gene_4021|Tiso_gene_9833|Tiso_gene_18959|Tiso_gene_4020|Tiso_gene_19622|Tiso_gene_2988|Tiso_gene_11913}}
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* LIGAND-CPD:
{{#set: in pathway=}}
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** [http://www.genome.jp/dbget-bin/www_bget?C03319 C03319]
{{#set: reconstruction category=annotation}}
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* CHEBI:
{{#set: reconstruction tool=pathwaytools}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57510 57510]
{{#set: reconstruction source=in-silico_annotation}}
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* BIGG : dtdprmn
 +
{{#set: smiles=CC1(=CN(C(=O)NC(=O)1)C3(CC(O)C(COP(=O)([O-])OP(=O)([O-])OC2(OC(C)C(O)C(O)C(O)2))O3))}}
 +
{{#set: inchi key=InChIKey=ZOSQFDVXNQFKBY-CGAXJHMRSA-L}}
 +
{{#set: common name=dTDP-β-L-rhamnose}}
 +
{{#set: molecular weight=546.317    }}
 +
{{#set: common name=dTDP-6-deoxy-β-L-mannose}}
 +
{{#set: produced by=DTDPDEHYRHAMREDUCT-RXN}}

Revision as of 18:43, 18 March 2018

Metabolite DTDP-RHAMNOSE

  • smiles:
    • CC1(=CN(C(=O)NC(=O)1)C3(CC(O)C(COP(=O)([O-])OP(=O)([O-])OC2(OC(C)C(O)C(O)C(O)2))O3))
  • inchi key:
    • InChIKey=ZOSQFDVXNQFKBY-CGAXJHMRSA-L
  • common name:
    • dTDP-β-L-rhamnose
  • molecular weight:
    • 546.317
  • Synonym(s):
    • dTDP-6-deoxy-β-L-mannose

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 572-96-3
  • PUBCHEM:
  • HMDB : HMDB06354
  • LIGAND-CPD:
  • CHEBI:
  • BIGG : dtdprmn
"CC1(=CN(C(=O)NC(=O)1)C3(CC(O)C(COP(=O)([O-])OP(=O)([O-])OC2(OC(C)C(O)C(O)C(O)2))O3))" cannot be used as a page name in this wiki.