Difference between revisions of "RXN-13697"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1401 RXN0-1401] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidine_phosphorylase * e...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5226 RXN0-5226] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-hexosaminidase * ec nu...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1401 RXN0-1401] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5226 RXN0-5226] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** thymidine_phosphorylase
+
** beta-hexosaminidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.4.23 EC-2.7.4.23]
+
** [http://enzyme.expasy.org/EC/3.2.1.52 EC-3.2.1.52]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[RIBOSE-15-BISPHOSPHATE]][c] '''=>''' 1 [[PRPP]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[CPD0-1081]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-882]][c] '''+''' 1 [[N-ACETYL-D-GLUCOSAMINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 α-D-ribose 1,5-bisphosphate[c] '''=>''' 1 5-phospho-α-D-ribose 1-diphosphate[c] '''+''' 1 ADP[c]
+
** 1 N-acetyl-β-D-glucosamine(anhydrous)-N-acetylmuramate[c] '''+''' 1 H2O[c] '''=>''' 1 1,6-anhydro-N-acetyl-β-muramate[c] '''+''' 1 N-acetyl-β-D-glucosamine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_1011]]
+
* [[Tiso_gene_14122]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_1129]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7805]], aminomethylphosphonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7805 PWY-7805]
+
* [[PWY0-1261]], anhydromuropeptides recycling: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1261 PWY0-1261]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY0-661]], PRPP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-661 PWY0-661]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-7807]], glyphosate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7807 PWY-7807]
+
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20109 20109]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R06836 R06836]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=thymidine_phosphorylase}}
+
{{#set: common name=beta-hexosaminidase}}
−
{{#set: ec number=EC-2.7.4.23}}
+
{{#set: ec number=EC-3.2.1.52}}
−
{{#set: gene associated=Tiso_gene_1011}}
+
{{#set: gene associated=Tiso_gene_14122|Tiso_gene_1129}}
−
{{#set: in pathway=PWY-7805|PWY0-661|PWY-7807}}
+
{{#set: in pathway=PWY0-1261}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Revision as of 19:43, 18 March 2018

Reaction RXN0-5226

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • beta-hexosaminidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 N-acetyl-β-D-glucosamine(anhydrous)-N-acetylmuramate[c] + 1 H2O[c] => 1 1,6-anhydro-N-acetyl-β-muramate[c] + 1 N-acetyl-β-D-glucosamine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1261, anhydromuropeptides recycling: PWY0-1261
    • 2 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13697&oldid=26410"