Difference between revisions of "Tiso gene 15142"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN] == * direction: ** LEF...")
(Created page with "Category:Gene == Gene Tiso_gene_1444 == * left end position: ** 16376 * transcription direction: ** NEGATIVE * right end position: ** 18034 * centisome position: ** 69.053...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN] ==
+
== Gene Tiso_gene_1444 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 16376
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/2.3.1.191 EC-2.3.1.191]
+
** NEGATIVE
 +
* right end position:
 +
** 18034
 +
* centisome position:
 +
** 69.05334   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[ATPASE-RXN]]
−
** 1 [[R-3-hydroxymyristoyl-ACPs]][c] '''+''' 1 [[UDP-OHMYR-GLUCOSAMINE]][c] '''=>''' 1 [[OH-MYRISTOYL]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[PROTON]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 a (3R)-3-hydroxymyristoyl-[acp][c] '''+''' 1 UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine[c] '''=>''' 1 UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 H+[c]
+
** experimental_annotation
−
 
+
***ec-number
−
== Genes associated with this reaction  ==
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** in-silico_annotation
−
* [[Tiso_gene_2638]]
+
***ec-number
−
** [[pantograph]]-[[synechocystis]]
+
** experimental_annotation
−
== Pathways  ==
+
***ec-number
−
* [[NAGLIPASYN-PWY]], lipid IVA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=NAGLIPASYN-PWY NAGLIPASYN-PWY]
+
* [[RXN-12195]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** in-silico_annotation
−
== Reconstruction information  ==
+
***ec-number
−
* [[orthology]]:
+
** experimental_annotation
−
** [[pantograph]]:
+
***ec-number
−
*** [[synechocystis]]
+
* [[RXN-12196]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN0-5462]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
== Pathways associated ==
 +
* [[PWY-7184]]
 +
* [[PWY-7198]]
 +
* [[PWY-6545]]
 +
* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=16376}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04550 R04550]
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=18034}}
−
{{#set: ec number=EC-2.3.1.191}}
+
{{#set: centisome position=69.05334    }}
−
{{#set: gene associated=Tiso_gene_2638}}
+
{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
−
{{#set: in pathway=NAGLIPASYN-PWY}}
+
{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis}}
+

Revision as of 18:51, 18 March 2018

Gene Tiso_gene_1444

  • left end position:
    • 16376
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 18034
  • centisome position:
    • 69.05334
  • Synonym(s):

Reactions associated

  • ATPASE-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • NUCLEOSIDE-TRIPHOSPHATASE-RXN
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-12195
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN-12196
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number
  • RXN0-5462
    • in-silico_annotation
      • ec-number
    • experimental_annotation
      • ec-number

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15142&oldid=27302"