Difference between revisions of "2.7.12.1-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2006 RXN-2006] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
(Created page with "Category:Gene == Gene Tiso_gene_3314 == * left end position: ** 11991 * transcription direction: ** POSITIVE * right end position: ** 14388 * centisome position: ** 70.411...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2006 RXN-2006] ==
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== Gene Tiso_gene_3314 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 11991
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* transcription direction:
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** POSITIVE
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* right end position:
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** 14388
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* centisome position:
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** 70.41104   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-514]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[BENZOYLCOA]][c]
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** [[pantograph]]-[[esiliculosus]]
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* With common name(s):
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* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
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** 1 coenzyme A[c] '''+''' 1 3-oxo-3-phenylpropanoyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 benzoyl-CoA[c]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-15684]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* [[Tiso_gene_16181]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[athaliana]]
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* [[THIOL-OXIDASE-RXN]]
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** in-silico_annotation
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***ec-number
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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== Pathways associated ==
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* [[P281-PWY]], 3-phenylpropanoate degradation: [http://metacyc.org/META/NEW-IMAGE?object=P281-PWY P281-PWY]
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* [[PWY-7539]]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7533]]
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* [[PWY-481]], ethylbenzene degradation (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-481 PWY-481]
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* [[PWY-6797]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6147]]
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* [[PWY-6443]], benzoate biosynthesis I (CoA-dependent, β-oxidative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6443 PWY-6443]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6458]], benzoyl-CoA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6458 PWY-6458]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=11991}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05506 R05506]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=14388}}
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{{#set: gene associated=Tiso_gene_16181}}
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{{#set: centisome position=70.41104    }}
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{{#set: in pathway=P281-PWY|PWY-481|PWY-6443|PWY-6458}}
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{{#set: reaction associated=DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN|H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN|RXN-15684|THIOL-OXIDASE-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-7539|PWY-7533|PWY-6797|PWY-6147}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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Revision as of 18:52, 18 March 2018

Gene Tiso_gene_3314

  • left end position:
    • 11991
  • transcription direction:
    • POSITIVE
  • right end position:
    • 14388
  • centisome position:
    • 70.41104
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=2.7.12.1-RXN&oldid=27537"