Difference between revisions of "RXN0-6491"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCLDH GCLDH] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycolate dehydrogenase * Synonym(s...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COPROPORPHYRINOGEN_III COPROPORPHYRINOGEN_III] == * smiles: ** CC1(=C2(CC5(=C(C)C(CCC([O-])=O)=...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCLDH GCLDH] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COPROPORPHYRINOGEN_III COPROPORPHYRINOGEN_III] ==
* direction:
+
* smiles:
** LEFT-TO-RIGHT
+
** CC1(=C2(CC5(=C(C)C(CCC([O-])=O)=C(CC4(=C(CCC([O-])=O)C(C)=C(CC3(=C(CCC(=O)[O-])C(C)=C(CC(=C(CCC([O-])=O)1)N2)N3))N4))N5)))
 +
* inchi key:
 +
** InChIKey=NIUVHXTXUXOFEB-UHFFFAOYSA-J
 
* common name:
 
* common name:
** Glycolate dehydrogenase
+
** coproporphyrinogen III
 +
* molecular weight:
 +
** 656.734   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
* [[RXN0-1461]]
** 1.0 [[Oxidized-ferredoxins]][m] '''+''' 1.0 [[GLYCOLLATE]][m] '''=>''' 1.0 [[GLYOX]][m] '''+''' 1.0 [[Reduced-ferredoxins]][m]
+
* [[HEMN-RXN]]
* With common name(s):
+
== Reaction(s) known to produce the compound ==
** 1.0 an oxidized ferredoxin [iron-sulfur] cluster[m] '''+''' 1.0 glycolate[m] '''=>''' 1.0 glyoxylate[m] '''+''' 1.0 a reduced ferredoxin [iron-sulfur] cluster[m]
+
* [[UROGENDECARBOX-RXN]]
 
+
== Reaction(s) of unknown directionality ==
== Genes associated with this reaction  ==
+
Genes have been associated with this reaction based on different elements listed below.
+
* [[Tiso_gene_6420]]
+
** [[pantograph]]-[[creinhardtii]]
+
* [[Tiso_gene_17319]]
+
** [[pantograph]]-[[creinhardtii]]
+
== Pathways  ==
+
== Reconstruction information  ==
+
* [[orthology]]:
+
** [[pantograph]]:
+
*** [[creinhardtii]]
+
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
* CAS : 2624-63-7
{{#set: common name=Glycolate dehydrogenase}}
+
* METABOLIGHTS : MTBLC57309
{{#set: gene associated=Tiso_gene_6420|Tiso_gene_17319}}
+
* PUBCHEM:
{{#set: in pathway=}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=20849114 20849114]
{{#set: reconstruction category=orthology}}
+
* HMDB : HMDB01261
{{#set: reconstruction tool=pantograph}}
+
* LIGAND-CPD:
{{#set: reconstruction source=creinhardtii}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C03263 C03263]
 +
* CHEMSPIDER:
 +
** [http://www.chemspider.com/Chemical-Structure.20171552.html 20171552]
 +
* CHEBI:
 +
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57309 57309]
 +
* BIGG : cpppg3
 +
{{#set: smiles=CC1(=C2(CC5(=C(C)C(CCC([O-])=O)=C(CC4(=C(CCC([O-])=O)C(C)=C(CC3(=C(CCC(=O)[O-])C(C)=C(CC(=C(CCC([O-])=O)1)N2)N3))N4))N5)))}}
 +
{{#set: inchi key=InChIKey=NIUVHXTXUXOFEB-UHFFFAOYSA-J}}
 +
{{#set: common name=coproporphyrinogen III}}
 +
{{#set: molecular weight=656.734    }}
 +
{{#set: consumed by=RXN0-1461|HEMN-RXN}}
 +
{{#set: produced by=UROGENDECARBOX-RXN}}

Revision as of 18:57, 18 March 2018

Metabolite COPROPORPHYRINOGEN_III

  • smiles:
    • CC1(=C2(CC5(=C(C)C(CCC([O-])=O)=C(CC4(=C(CCC([O-])=O)C(C)=C(CC3(=C(CCC(=O)[O-])C(C)=C(CC(=C(CCC([O-])=O)1)N2)N3))N4))N5)))
  • inchi key:
    • InChIKey=NIUVHXTXUXOFEB-UHFFFAOYSA-J
  • common name:
    • coproporphyrinogen III
  • molecular weight:
    • 656.734
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 2624-63-7
  • METABOLIGHTS : MTBLC57309
  • PUBCHEM:
  • HMDB : HMDB01261
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • BIGG : cpppg3
"CC1(=C2(CC5(=C(C)C(CCC([O-])=O)=C(CC4(=C(CCC([O-])=O)C(C)=C(CC3(=C(CCC(=O)[O-])C(C)=C(CC(=C(CCC([O-])=O)1)N2)N3))N4))N5)))" cannot be used as a page name in this wiki.