Difference between revisions of "RIBITOLUTIL-PWY"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_743 == * left end position: ** 18842 * transcription direction: ** NEGATIVE * right end position: ** 23716 * centisome position: ** 65.0621...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formamidopyrimidine-d...") |
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| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.23-RXN 3.2.2.23-RXN] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** formamidopyrimidine-dna_glycosylase |
| − | * | + | ** endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b |
| − | ** | + | ** n-glycosylase_dna_lyase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/3.2.2.23 EC-3.2.2.23] |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | + | ** 1 [[DNA-containing-diamino-hydro-formamidops]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DNA-containing-aPurinic-Sites]][c] '''+''' 1 [[CPD-16491]][c] | |
| − | *** | + | * With common name(s): |
| − | ** [[ | + | ** 1 a ring-opened 7-methylguanine in DNA[c] '''+''' 1 H2O[c] '''=>''' 1 an apurinic site within DNA[c] '''+''' 1 2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimidine[c] |
| − | ** [[ | + | |
| − | ** [[ | + | == Genes associated with this reaction == |
| − | ** [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| − | == Pathways | + | * Gene: [[Tiso_gene_16992]] |
| − | * [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_1280]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Tiso_gene_9068]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_6558]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Tiso_gene_14609]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | == Pathways == | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * UNIPROT: |
| − | {{#set: | + | ** [http://www.uniprot.org/uniprot/P44948 P44948] |
| − | {{#set: | + | ** [http://www.uniprot.org/uniprot/P57014 P57014] |
| − | {{#set: | + | ** [http://www.uniprot.org/uniprot/P05523 P05523] |
| − | {{#set: | + | ** [http://www.uniprot.org/uniprot/P19210 P19210] |
| − | {{#set: pathway | + | ** [http://www.uniprot.org/uniprot/P74290 P74290] |
| + | ** [http://www.uniprot.org/uniprot/O69470 O69470] | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=formamidopyrimidine-dna_glycosylase}} | ||
| + | {{#set: common name=endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b}} | ||
| + | {{#set: common name=n-glycosylase_dna_lyase}} | ||
| + | {{#set: ec number=EC-3.2.2.23}} | ||
| + | {{#set: gene associated=Tiso_gene_16992|Tiso_gene_1280|Tiso_gene_9068|Tiso_gene_6558|Tiso_gene_14609}} | ||
| + | {{#set: in pathway=}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Revision as of 14:54, 21 March 2018
Contents
Reaction 3.2.2.23-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- formamidopyrimidine-dna_glycosylase
- endonuclease_iii_8-oxoguanine_dna_glycosylase_isoform_1b
- n-glycosylase_dna_lyase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 DNA-containing-diamino-hydro-formamidops[c] + 1 WATER[c] => 1 DNA-containing-aPurinic-Sites[c] + 1 CPD-16491[c]
- With common name(s):
- 1 a ring-opened 7-methylguanine in DNA[c] + 1 H2O[c] => 1 an apurinic site within DNA[c] + 1 2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimidine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_16992
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_1280
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_9068
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_6558
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_14609
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
