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| Line 1: |
Line 1: |
| − | [[Category:Pathway]] | + | [[Category:Gene]] |
| − | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789] == | + | == Gene Tiso_gene_16490 == |
| − | * taxonomic range: | + | * right end position: |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-28889 TAX-28889] | + | ** 3521 |
| − | * common name: | + | * transcription direction: |
| − | ** 3-hydroxypropanoate/4-hydroxybutanate cycle | + | ** NEGATIVE |
| | + | * left end position: |
| | + | ** 443 |
| | + | * centisome position: |
| | + | ** 10.252256 |
| | * Synonym(s): | | * Synonym(s): |
| − | ** 3-HP/4-HB cycle
| |
| − | ** 3-hydroxypropionate/4-hydroxybutyrate cycle
| |
| | | | |
| − | == Reaction(s) found == | + | == Reactions associated == |
| − | '''8''' reactions found over '''16''' reactions in the full pathway
| + | * Reaction: [[3.5.1.98-RXN]] |
| − | * [[ACETYL-COA-ACETYLTRANSFER-RXN]] | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ** 3 associated gene(s):
| + | *** Assignment: automated-name-match |
| − | *** [[Tiso_gene_16181]]
| + | == Pathways associated == |
| − | *** [[Tiso_gene_15327]]
| + | |
| − | *** [[Tiso_gene_17451]]
| + | |
| − | ** 4 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | *** [[orthology-synechocystis]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
| + | |
| − | ** 4 associated gene(s):
| + | |
| − | *** [[Tiso_gene_7965]]
| + | |
| − | *** [[Tiso_gene_2812]]
| + | |
| − | *** [[Tiso_gene_5029]]
| + | |
| − | *** [[Tiso_gene_3800]]
| + | |
| − | ** 5 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[manual-primary_network]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[METHYLMALONYL-COA-MUT-RXN]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_9771]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | * [[PROPIONYL-COA-CARBOXY-RXN]]
| + | |
| − | ** 1 associated gene(s): | + | |
| − | *** [[Tiso_gene_5029]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-11002]]
| + | |
| − | ** 0 associated gene:
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | * [[RXN-11662]] | + | |
| − | ** 7 associated gene(s): | + | |
| − | *** [[Tiso_gene_5857]]
| + | |
| − | *** [[Tiso_gene_16703]]
| + | |
| − | *** [[Tiso_gene_14027]]
| + | |
| − | *** [[Tiso_gene_14262]]
| + | |
| − | *** [[Tiso_gene_14026]]
| + | |
| − | *** [[Tiso_gene_18838]]
| + | |
| − | *** [[Tiso_gene_18839]]
| + | |
| − | ** 5 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | * [[RXN-11667]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[Tiso_gene_5857]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | * [[RXN-6383]]
| + | |
| − | ** 3 associated gene(s):
| + | |
| − | *** [[Tiso_gene_5857]]
| + | |
| − | *** [[Tiso_gene_16703]]
| + | |
| − | *** [[Tiso_gene_14257]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-athaliana]]
| + | |
| − | *** [[orthology-creinhardtii]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | == Reaction(s) not found == | + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-8890 RXN-8890]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-8891 RXN-8891]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-8963 RXN-8963]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-8974 RXN-8974]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-9086 RXN-9086]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-9087 RXN-9087]
| + | |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-9092 RXN-9092]
| + | |
| | == External links == | | == External links == |
| − | {{#set: taxonomic range=TAX-28889}} | + | {{#set: right end position=3521}} |
| − | {{#set: common name=3-hydroxypropanoate/4-hydroxybutanate cycle}} | + | {{#set: transcription direction=NEGATIVE}} |
| − | {{#set: common name=3-HP/4-HB cycle|3-hydroxypropionate/4-hydroxybutyrate cycle}} | + | {{#set: left end position=443}} |
| − | {{#set: reaction found=8}} | + | {{#set: centisome position=10.252256 }} |
| − | {{#set: total reaction=16}} | + | {{#set: reaction associated=3.5.1.98-RXN}} |
| − | {{#set: completion rate=50.0}}
| + | |
