Difference between revisions of "Tiso gene 4693"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_9110 == * left end position: ** 8506 * transcription direction: ** POSITIVE * right end position: ** 9567 * centisome position: ** 88.51197...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7238 RXN0-7238] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** long...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_9110 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7238 RXN0-7238] ==
−
* left end position:
+
* direction:
−
** 8506
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** polyketide_synthase
−
* right end position:
+
** long_chain_acyl-_synthetase
−
** 9567
+
** acyl-_synthetase
−
* centisome position:
+
** ORF
−
** 88.51197   
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[GLUC1PURIDYLTRANS-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[PROTON]][e] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-9247]][e] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CPD-18346]][c]
−
***ec-number
+
* With common name(s):
−
** experimental_annotation
+
** 1 H+[e] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 cis-vaccenate[e] '''=>''' 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 cis-vaccenoyl-CoA[c]
−
***ec-number
+
 
−
** [[pantograph]]-[[athaliana]]
+
== Genes associated with this reaction  ==
−
** [[pantograph]]-[[esiliculosus]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[UG1PUT]]
+
* Gene: [[Tiso_gene_10876]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[UTPHEXPURIDYLYLTRANS-RXN]]
+
*** Assignment: EC-NUMBER
−
** experimental_annotation
+
* Gene: [[Tiso_gene_13394]]
−
***automated-name-match
+
** Source: [[annotation-in-silico_annotation]]
−
== Pathways associated ==
+
*** Assignment: EC-NUMBER
−
* [[PWY-7238]]
+
* Gene: [[Tiso_gene_135]]
−
* [[PWY-7343]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-3801]]
+
*** Assignment: EC-NUMBER
−
* [[PWY-3821]]
+
* Gene: [[Tiso_gene_136]]
−
* [[PWY-7817]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-6527]]
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9394]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_500]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_4191]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_348]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_7855]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=8506}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: right end position=9567}}
+
{{#set: common name=long_chain_acyl-_synthetase}}
−
{{#set: centisome position=88.51197    }}
+
{{#set: common name=acyl-_synthetase}}
−
{{#set: reaction associated=GLUC1PURIDYLTRANS-RXN|UG1PUT|UTPHEXPURIDYLYLTRANS-RXN}}
+
{{#set: common name=ORF}}
−
{{#set: pathway associated=PWY-7238|PWY-7343|PWY-3801|PWY-3821|PWY-7817|PWY-6527}}
+
{{#set: ec number=EC-6.2.1.3}}
 +
{{#set: gene associated=Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_135|Tiso_gene_136|Tiso_gene_9394|Tiso_gene_500|Tiso_gene_4191|Tiso_gene_348|Tiso_gene_7855}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:59, 21 March 2018

Reaction RXN0-7238

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • long_chain_acyl-_synthetase
    • acyl-_synthetase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[e] + 1 ATP[c] + 1 coenzyme A[c] + 1 cis-vaccenate[e] => 1 H+[c] + 1 AMP[c] + 1 diphosphate[c] + 1 cis-vaccenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4693&oldid=31661"