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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-AMINOTRANSFERASE-RXN ALANINE-AMINOTRANSFERASE-RXN] == | + | == Gene Tiso_gene_19492 == |
| − | * direction: | + | * right end position: |
| − | ** REVERSIBLE | + | ** 1628 |
| − | * common name: | + | * transcription direction: |
| − | ** alanine_aminotransferase_mitochondrial | + | ** POSITIVE |
| − | ** alanine_aminotransferase | + | * left end position: |
| − | * ec number: | + | ** 166 |
| − | ** [http://enzyme.expasy.org/EC/2.6.1.2 EC-2.6.1.2] | + | * centisome position: |
| | + | ** 7.296703 |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * Reaction: [[R4-RXN]] |
| − | ** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[PYRUVATE]][c]
| + | |
| − | * With common name(s):
| + | |
| − | ** 1 2-oxoglutarate[c] '''+''' 1 L-alanine[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 pyruvate[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_5959]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_10957]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | == Pathways ==
| + | |
| − | * [[ALANINE-DEG3-PWY]], L-alanine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-DEG3-PWY ALANINE-DEG3-PWY]
| + | |
| − | ** '''1''' reactions found over '''1''' reactions in the full pathway
| + | |
| − | * [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7383 PWY-7383]
| + | |
| − | ** '''5''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
| + | |
| − | ** '''7''' reactions found over '''10''' reactions in the full pathway
| + | |
| − | * [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate): [http://metacyc.org/META/NEW-IMAGE?object=ALACAT2-PWY ALACAT2-PWY]
| + | |
| − | ** '''2''' reactions found over '''3''' reactions in the full pathway
| + | |
| − | * [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
| + | |
| − | ** '''7''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[ALANINE-SYN2-PWY]], L-alanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-SYN2-PWY ALANINE-SYN2-PWY]
| + | |
| − | ** '''1''' reactions found over '''1''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | * Category: [[manual]]
| + | |
| − | ** Source: [[manual-primary_network]]
| + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | ** Source: [[annotation-in-silico_annotation]] | | ** Source: [[annotation-in-silico_annotation]] |
| − | *** Tool: [[pathwaytools]] | + | *** Assignment: automated-name-match |
| | + | == Pathways associated == |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: right end position=1628}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19453 19453]
| + | {{#set: transcription direction=POSITIVE}} |
| − | * LIGAND-RXN:
| + | {{#set: left end position=166}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00258 R00258]
| + | {{#set: centisome position=7.296703 }} |
| − | * UNIPROT:
| + | {{#set: reaction associated=R4-RXN}} |
| − | ** [http://www.uniprot.org/uniprot/P13191 P13191]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P25409 P25409]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P24298 P24298]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9UR81 Q9UR81]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P34106 P34106]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P52894 P52894]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q42685 Q42685]
| + | |
| − | {{#set: direction=REVERSIBLE}} | + | |
| − | {{#set: common name=alanine_aminotransferase_mitochondrial}} | + | |
| − | {{#set: common name=alanine_aminotransferase}} | + | |
| − | {{#set: ec number=EC-2.6.1.2}} | + | |
| − | {{#set: gene associated=Tiso_gene_5959|Tiso_gene_10957}} | + | |
| − | {{#set: in pathway=ALANINE-DEG3-PWY|PWY-7383|PWY-7117|ALACAT2-PWY|PWY-7115|ALANINE-SYN2-PWY}}
| + | |
| − | {{#set: reconstruction category=orthology|manual|annotation}}
| + | |
| − | {{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|manual-primary_network|orthology-esiliculosus}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
